Detailed information of aint_s0053.g50.t2 in Acropora intermedia

Genomic Location: sc0000053_pilon:1096940...1155345
NR annotation: XP_015780401.1, PREDICTED: poly(A) polymerase type 3-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P51003Poly(A) polymerase alpha OS=Homo sapiens OX=9606 GN=PAPOLA PE=1 SV=4
P25500Poly(A) polymerase alpha OS=Bos taurus OX=9913 GN=PAPOLA PE=1 SV=3
Q61183Poly(A) polymerase alpha OS=Mus musculus OX=10090 GN=Papola PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04926PAP_RNA-bindPoly(A) polymerase predicted RNA binding domainDomainInterproscan
PF04928PAP_centralPoly(A) polymerase central domainDomainInterproscan
PF20750PAP_NTPasePoly(A) polymerase nucleotidyltransferase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043519Homologous_superfamilyNucleotidyltransferase superfamilyInterproscan
IPR035994Homologous_superfamilyNucleoside phosphorylase superfamilyInterproscan
IPR007010DomainPoly(A) polymerase, RNA-binding domainInterproscan
IPR007012DomainPoly(A) polymerase, central domainInterproscan
IPR011068Homologous_superfamilyNucleotidyltransferase, class I-like, C-terminalInterproscan
IPR048840DomainPoly(A) polymerase, nucleotidyltransferase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10682POLY A POLYMERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0009116Biological Processnucleoside metabolic processInterproscan
GO:0004652Molecular Functionobsolete polynucleotide adenylyltransferase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006378Biological Processobsolete mRNA polyadenylationInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:1990817Molecular Functionpoly(A) RNA polymerase activityInterproscan
GO:0016779Molecular Functionnucleotidyltransferase activityInterproscan
GO:0031123Biological ProcessRNA 3'-end processingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14376PAP; poly(A) polymeraseEC:2.7.7.19
Messenger RNA biogenesisko03019deepkoala

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