Detailed information of aint_s0066.g43.t1 in Acropora intermedia

Genomic Location: sc0000066_pilon:584145...620066
NR annotation: XP_029189647.2, serine palmitoyltransferase 2-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q3B7D2Serine palmitoyltransferase 2 OS=Rattus norvegicus OX=10116 GN=Sptlc2 PE=1 SV=1
P97363Serine palmitoyltransferase 2 OS=Mus musculus OX=10090 GN=Sptlc2 PE=1 SV=2
O54694Serine palmitoyltransferase 2 OS=Cricetulus griseus OX=10029 GN=SPTLC2 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF00155Aminotran_1_2Aminotransferase class I and IIDomainInterproscan
PF00754F5_F8_type_CF5/8 type C domainDomainInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR050087Family8-amino-7-oxononanoate synthase class-IIInterproscan
IPR001917Binding_siteAminotransferase, class-II, pyridoxal-phosphate binding siteInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR004839DomainAminotransferase, class I/classIIInterproscan
IPR015421Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan
IPR015422Homologous_superfamilyPyridoxal phosphate-dependent transferase, small domainInterproscan
IPR015424Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13693CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004758Molecular Functionserine C-palmitoyltransferase activityInterproscan
GO:0017059Cellular Componentserine palmitoyltransferase complexInterproscan
GO:0046512Biological Processsphingosine biosynthetic processInterproscan
GO:0046513Biological Processceramide biosynthetic processInterproscan
GO:0016740Molecular Functiontransferase activityInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0009058Biological Processbiosynthetic processInterproscan
GO:0030170Molecular Functionpyridoxal phosphate bindingInterproscan

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