Gene detail

Detailed information of aint_s0070.g30.t1 in Acropora intermedia

Genomic Location: sc0000070_pilon:258966...262861
NR annotation: XP_015756699.1, PREDICTED: AP-1 complex subunit sigma-2-like isoform X4 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P56377	AP-1 complex subunit sigma-2 OS=Homo sapiens OX=9606 GN=AP1S2 PE=1 SV=1
Q3ZBS3	AP-1 complex subunit sigma-2 OS=Bos taurus OX=9913 GN=AP1S2 PE=2 SV=1
Q9DB50	AP-1 complex subunit sigma-2 OS=Mus musculus OX=10090 GN=Ap1s2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01217	Clat_adaptor_s	Clathrin adaptor complex small chain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR044733	Family	AP-1 complex subunit sigma	Interproscan
IPR011012	Homologous_superfamily	Longin-like domain superfamily	Interproscan
IPR016635	Family	Adaptor protein complex, sigma subunit	Interproscan
IPR022775	Domain	AP complex, mu/sigma subunit	Interproscan
IPR000804	Conserved_site	Clathrin adaptor complex, small chain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11753	ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016192	Biological Process	vesicle-mediated transport	Interproscan
GO:0030121	Cellular Component	AP-1 adaptor complex	Interproscan
GO:0035615	Molecular Function	clathrin adaptor activity	Interproscan
GO:0015031	Biological Process	protein transport	Interproscan
GO:0043231	Cellular Component	intracellular membrane-bounded organelle	Interproscan
GO:0006886	Biological Process	intracellular protein transport	Interproscan
GO:0030117	Cellular Component	membrane coat	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12394	AP1S1_2; AP-1 complex subunit sigma 1/2	-	Membrane trafficking	ko04131	deepkoala