Gene detail

Detailed information of aint_s0071.g1.t1 in Acropora intermedia

Genomic Location: sc0000071_pilon:134786...149688
NR annotation: XP_029206266.1, adenylyl cyclase-associated protein 1-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aint_s0071.g1.t1

TCGCTGCTTGATTTTCACATCAAATCAGATTGTCAATAGGGATTTAACAACTGTTAATTAGCTTGGTTTTGGACACTCTATCAATCAAGTGTCCCGGTGGACCATTTGCAAGAAGAAAAGTAAGACTATGCGCAAGTAGCTATTGGCTGGCCACTTAAGCCGCTAATGCTGACCCAGGAGACTTGATATCTCAAGCGTTGCTAGCCCGGGTTGTTCTGGAAACAAAAGTTAGTTCTGAGCTACCACCAACGGGAAGGAAAAAAAGAAAAACAAAATAAAATCCACTGAACGAGGAGGATGATCCGACAAGAGGACAACAGACTCACAAAGTTATTCGTCGGAGGGATTCCTTACGATACAGATGACGACTCTTTGAGAGAATTTTTTATCCAGTATGGAGAGATCAAAGAGGCAGTTGTCATTCGAGACAGAGATACACTTAAATCCAAGGGTTACGGATTTGTTACCTTTTTTGACAAAGATTGCGCAGAGAAAGCGTGTGTAAACAGAAGACCGGTAATCGACGGAAGAACAGCAAACGTAAATTTAGCCTACATTGGCGCCAAACCAAAACCGACGAAAGGAACTGGAAAGTACGCCGCGATGACTAGTAATGGACTTGCATATAAACAAAATCTGCAGAAGACAATTATGGGATCGCAGCAATTTTGTGGCAGTTTCCCTAATGGTTTTTCCCAAGCGATTCCCTCGACCCAACAGCTTCAAACTGTACAGGCTGCGCTTTTGTCCCCAGTTCACCCGCAATCACCGAACGGTCAAGATATTTGCTTTATTTCAATTGTTGTTAGACCATTTTTCGGCATGTCCGGGGATCTGAGTGCTCTCGTAGCTCGTCTTGAAGCTGTCACTACTCGTCTGGAGGCTGCTGCTGATAAAACAGGCGGCGGAGCTTCAGAAGATGTTGGAGTATCGGTTGAAGGGTACGACAAGGTGTTAAATGACAAAGTAGCTGAGTTTTACAAGCTTTCAGCCAAAATAGGGGGTGAAGTGGAAGAACAGGTTCAGCTAGTTAAGAAGGCATTTGATGCTCAGCGGCAGTTCATAGTCATTGCTTCTAAGAATCAGAAGCCAGGCTTGGAAGAATTTAAAAAGCTGGTGAAACCAACGGCTGATGCTATGGGTGAAGCTCAGAACTACCGAGAGAAGAAGCGCTCAAGCAAAATGTTTAACCACTTATCCGCTGTTAGTGAAGCCATTCCAGCTCTGGGATGGGTAACTGTGAGCCCCACTCCTGCACCTTATGTCAAAGAGATGGTAGATGCAGCCCAGTTCTACATGAACAGAGTCTTAAAAGACTACAAGGGAAAGGATGACACACATGTTGAGTGGGTGAAATGTCTTAAAGATGCCCTCACTGACCTCCAAGCTTATGTCAAGGCAAATCACACAACTGGGCTGGTTTGGAGCAAAACAGGTGGAGTGGCAAAGGCAGCAGCTGCAGCTGCAGCACCCCCACAGGGTCCAAAGCCAGCAGCTCCTCCCCCTCCCCCAATACAAGCACCTGCACCAGTGAGCTCAGGAACAGACCAGACAGGAGCTGCCAATGCCTTATTTAGTGAGATTAACAAGGCAGGAACAAATATTTCAGCAGGATTAAGAAAAGTTCGAGATGATGAGAAGACCCACAAGAACAAAGAACTGAGGAAAACTGGACCAGTTCCAGACAGACCCAAACCTTCTCTAGCAGCTAAACCAAAAGCTGCTGCTGCTGTCAAGAAACCACCTGTGTTTCAACTGCAAGGCAAAAAGTGGGTTGTGGAATATCAAGAAAAAAACAAGGATCTTGTAATTGCGGAGCCTCTTCAAACTCAGACAGTGTACATTTATAGCTGCAAGGACAGCACTATTCAAGTTCAGGGAAAAATCAACTCCTTGGTTGTAGATAATTGCAAGAAAACAGCAGTGGTTTTAGATGGTGCCATTGGCACTGTTGAATTCATCAATTGTCAGAGTGCACAGTGTCAGATCAACGACAGTGTTCCAACAGTTTCCATCGACAAAACTGATGGCTGCCAAGTGTTCTTTCCCAAGGGCATTGGAGCAACTGAAATAGTGACGGCTAAATCATCTGAGATGAATATTATGATTCCCAAACCAGGATCCCAAGATATGATGGAGTTCGCACTCCCTGAGCAGTACAAAAGCACTTGGAATGGCAAAACATTTGTAACTGTGTGCAGCGAATCACTTGGTTAAGTGTGTTGATTTGCTACAACCCCCTCCTCCCTTTCATGGAGAGTGTCAGGTTGTAGAATTAGATTACATATCAATTGGTCCTTTAAAGCGCGAATCTCAGGAAAATAGAAGTTTAAGGTCCACGAAACGAACGAAACATGTTGGCACAACATCATTCAACTTTAATCGATGCAACATCCCTGCCAGTGCTTCGGGTTTCTGTCTGAATATTGACCCCAGGGTCCCATCACTCACCTGCGGTCGATTTCCCATGACAGCCTAGCATTGTTAGCGGTATTGTGCCAACATGTTGCATTCATTTGCACGGGCCTTTTAGTAAACATGGAGCCCTTAACAGAAGTTTAACCGCCAATCGAAGAAATCATTTCAGTTTTGGTTTTGGTATGTTTTAAACTAAATCAGAAACAGAAGTGATTTTCCCTAAAGTGTTTGTATTTGCGAAAAGTAACATACCAAAAATTGTATTTTTTCTATTGCACGTGATAAGACCTTGCTATGAACAACACAGATTAAAGTTTTGACAGTATC

Protein

Uniprot

Uniprot term	Description
P40123	Adenylyl cyclase-associated protein 2 OS=Homo sapiens OX=9606 GN=CAP2 PE=1 SV=1
Q5R5X8	Adenylyl cyclase-associated protein 2 OS=Pongo abelii OX=9601 GN=CAP2 PE=2 SV=1
Q9CYT6	Adenylyl cyclase-associated protein 2 OS=Mus musculus OX=10090 GN=Cap2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08603	CAP_C	Adenylate cyclase associated (CAP) C terminal	Family	Interproscan
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan
PF01213	CAP_N	Adenylate cyclase associated (CAP) N terminal	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013912	Domain	Adenylate cyclase-associated CAP, C-terminal	Interproscan
IPR036222	Homologous_superfamily	Adenylate cyclase-associated CAP, N-terminal domain superfamily	Interproscan
IPR006599	Domain	CARP motif	Interproscan
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR017901	Domain	C-CAP/cofactor C-like domain	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR016098	Homologous_superfamily	Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal	Interproscan
IPR001837	Family	Adenylate cyclase-associated CAP	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR036223	Homologous_superfamily	Adenylate cyclase-associated CAP, C-terminal superfamily	Interproscan
IPR013992	Domain	Adenylate cyclase-associated CAP, N-terminal	Interproscan
IPR018106	Conserved_site	CAP, conserved site, N-terminal	Interproscan
IPR028417	Conserved_site	CAP, conserved site, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10652	ADENYLYL CYCLASE-ASSOCIATED PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003779	Molecular Function	actin binding	Interproscan
GO:0007010	Biological Process	cytoskeleton organization	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0000902	Biological Process	cell morphogenesis	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0007015	Biological Process	actin filament organization	Interproscan
GO:0008179	Molecular Function	adenylate cyclase binding	Interproscan
GO:0019933	Biological Process	cAMP-mediated signaling	Interproscan