Detailed information of aint_s0071.g64.t2 in Acropora intermedia

Genomic Location: sc0000071_pilon:778887...791413
NR annotation: XP_029206232.2, nucleolar RNA helicase 2-like isoform X1 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q99MJ9ATP-dependent RNA helicase DDX50 OS=Mus musculus OX=10090 GN=Ddx50 PE=2 SV=1
Q9NR30Nucleolar RNA helicase 2 OS=Homo sapiens OX=9606 GN=DDX21 PE=1 SV=5
Q9BQ39ATP-dependent RNA helicase DDX50 OS=Homo sapiens OX=9606 GN=DDX50 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF08152GUCTGUCT (NUC152) domainDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR012562DomainGUCTInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR050547FamilyDEAD box ATP-dependent RNA helicasesInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47963DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIALInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004386Molecular Functionhelicase activityInterproscan
GO:0003724Molecular FunctionRNA helicase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K16911DDX21; ATP-dependent RNA helicase DDX21EC:5.6.2.7
Chromosome and associated proteinsko03036deepkoala

TOP