Gene detail

Detailed information of aint_s0086.g13.t1 in Acropora intermedia

Genomic Location: sc0000086_pilon:266401...289755
NR annotation: XP_029192974.2, serine/threonine-protein kinase OSR1-like [Acropora millepora]
Species abbreviation AINTE · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

aint_s0086.g13.t1

GATTGTAATTTGTGTAAAATACACCCTTTCCCCTCGCTGGAAGGGAAGTCAACGAGCTTCAATTCAAGATGGCGGTTGCTGGAGAAAGATGGCCCAACGACAGGGAACAATATGAGCTTGAGGAAGTCATTGGTTACGGAGCAACCGCAGTAGTTCAAGCTGCCAACTGCATCCCTCGAAAAGAGCGAGTAGCTGTGAAGAGAATTGATCTGGAGAAGTGTGGGGCAAGCATCGACGAAATGATGAAAGAGATTCGCACCATGAGTCAGTGCAACCACGAGAATGTTGTAAACTATTACACATCGTTTGTGGTGAAGCAAGAACTGTGGATAATCATGAGGTTGCTTAATGGAGGTTCAATGCTTGATGTGATTAAACATCAAAAGAAGAAAGGCCACTGTGAGGATGGTATTCTTGATGAAGCTGTGATAGCATCTGTTTTGCGCGAGGTTCTCAAAGGTCTTAATTATTTTCACAGTCAAGGTCTCATTCACAGGGACGTGAAAGCAGGGAATATTTTGTTGGCTACCGATGGCACTGTTCAACTGGCTGACTTTGGTGTAAGTTCTGTCATTAGTGACTTCGGCGACAGGTCGAGGCCGAAGGTGCGCAAGACATTTGTGGGGACACCCTGCTGGATGGCCCCAGAAGTCATGGAACAGGTTCATGGTTATAACCACAAAGCTGATATTTGGAGTTTTGGTATCACTGCTATTGAGCTTGCTACAGGAGTTGCTCCCTATGCTAAATATCCAGCTATGAAGGTACTTATGCTGACCTTGCAAAATGATCCACCCTCTCTGGATACTGTTGCACAAAGTGAAAGCAACAAAGAAGGCTTCAAGAAATACTCCAAGGTTTTCAGAAAGATGATATCCAGTTGCCTGCAAAAAGATCCAGCCCAAAGGCCTGATGCAAGTGAACTTTTGAAGCTACCCTTTTTCAAAAAGGCTAGGGAGAAAGACTTTTTGATGGAAACATTAGTACCTTTAATGCCAAGTTTGGGAGAAAGATCACAAAAGGAAAACCTCTCTAAACCAGCGGCAATGGGTGTTCAAGTCCAACCGCCCACTCCAACATCACCCAAGGCCACCAGTTCGGAAGTCAACTTGGATCTCACGCTCAGATTAAGAAACGCCAAGAAAGAATTGAATGACATCAGATTCGATTTTACTCCTGGAAAAGATACGCCCGAAGGAGTGGCACAAGAGCTCGTGTCAGCTGGCTTAATAAGTGGTCAAGATTTAGTCGTAGTCGCTGCAAACCTTAGAAAAGTCATTGATAATCCTCCAAGTAGCAAATCTATGATGTTTCCTCTTAAATCCGGAGGCGGTTCGAAGGAAGCTGCGGACGACAAGACGTTGATTGGGTTCGCTCAACTTACAATCAACTCTTAGCGTCATCATACATGAAGTCCCGGGCCCGTTTGATTGTGTTACTTTGGAGTATTAATAATCCAAATGGTTTCATTCAAAAATCCGCTCTGCAAAATGGCTCTCTGAGATATTGGACGACAAATTGGCGTTAAAGCATCCTGCAGACAATTTTTTTAGGAGGTGAATATTTTGATTAATGCTCGGATCTCAATACAGCTAATTCAAGGCATAGGCTCAAGAACATACGCCTGTCGCTGCAAATAACCGTTTACTGACGTGTGTTGTCGGTGCCAGTTCCCCTTTCATACTCCAGGAAGAAAGCAGAACTGCCCTCAACGTGTGGTTATCCTAACGGGGCGTCAATTTTCACTCCAAAATAAAAGTGAAAAGGATGAACTTTTTCCGATTTCTTATTCTTATATCGTGAGCGTTCTCACTTAGACGTGTGCTTATGAATTGACGTAAATCAGCCTTAACGAGAGGTGCTGCTTATGAAAGCCCTCCATTCCATAACAAAATTAACAACAACAACAGCGATACAGACTGTGCATAAGTTAGTGTCTGTACTAATGGTTCGGCTTTTGTTGGAGCAGGTGCTGTGCAAACATCAATTTTAGTGTAAATCTCAAGTTCCCTGTGGTGTCTCCATGGTCTCAACTCTAGTTCGAATAAGCTTGAAAATCTTAGAAAAGTGAAACGTAACGAAATAGCATTGACGAAACTGCTGTCTTTCCAAGTGTTATGGCGCAAAAACATGCGCCCGCAAAGCATGTTTGTGGGCCAAGAAAGAACAGATTCCGTAGGTGCCGCATAGAAGTCTCGAAGCCTGTAAGATGTGCATGTGGCGCTTGCGTCTACTCCAGTTTCATTTACATTTCGTTGTATACGAGGTTGGGTATTAATAGAGGCCATTTTGAGCTCTTACTTCGAGTACCACGCATAATAGTTACCAATGTATGTCTCGATGTGTTTGGTCTCATCGTTGTTTTCTGGTGTTTTCTCTCCACGAAGTAAGAGCTCCATTTCGCGTCATTCCGTTTTCCATCTCAGACGCAATTTCTTTGTtaatcataaaaattacaatttcctcgcttgtgattggtttaaaaaaggcctattttccactaattcgcttgccaagttgttatcggacagtttgttattggatagtttgttattggacagtttgttagcggacagttcaaaaggccaatcacattcaaagatgtagtttaaaacaaccaatcacattcaaagttgtaattagCGTTATATAATTCTCAGTTTTTGAGCTCATAGTTTTGTCCATACTTTTATTGtattattattatattagtattattattattgttattattGCACGTCACTTTTCACGGGTTACCAAGGTAAATCCTTTATAATTCTTAACTTTTGCTTCATTGGACCTCATTAGGACCAAAAACCATGTTTAGTTTTCAGCCAAACTGAAGGTTTTTGGTACCAACCTGTGAAAAGCGGCCTGtagatattagggagcttaagcaaagacgacgtggacggcaacgaggacgttgtctgaaaatgtaacttcgggttcccgcgatcatttcccaattattcaaattcattaggcttgcgaaatgtgttctcactgtcctggaattaaattggaaccagcgcttcagaaacaagaagacaaacttgattatttgtcgtcatatgctcacgtcgtccacacaactgcaaaccggtcattttacgtcatggaaagagagagaacgtctgagaaatgttttaaaatgaataatccaggtgcaaagcgtgcaaaactattgtttttcgttgtcaaagatgcaaattgttgcgtcgtcgtcgtggttgcttaagctccctattGTAAGCGCCTCGTCCTTGGTGTGAAAATTCATCTTCAGAAGTAAGTCTAATTCCAGGGAAAAACAAAAGAGCGGGAAAAGATTGCATGCGCACGGTCGATGCTCGGAGGAGGTCGCGTCGCCATATTTTCTGCTCTCCGAGTCCCATGTCGCGCATTTCCAAGTCTCGAGCGTGCGCGAGTATTTTGCCCTCTCTTTTGTCTTTGAAACCAGACACAACTCGCAGTCGAGAAAAAGGGAGGGATCAATTAATAAATAATAAATAAGGCTTTGCCTTTGCCTTCAACAGCAAAGGACAGCGTCAAGCTGACCTTTGGCATGCAAACCACGAAAATCGTCTTATCTGTGGGTAAAAGGAAATTATACAAATCCATAATTACATTGTGTCGCCAGTTGCAACTTAGCTTGGCAAAGTATTTGTCTGCATTTGAAGCAACAGGAGTGTAGAACTGAAATTTTAAATTTTGACTCTTTTTGGAGAAAAAACAGTAATATTCCAGCATAGTTACTAACTATGATTCCAGGGAACTTACGGTCAGTTGAATGATCATTTTAAGTCAGCAACTAGTGCTCTTAATGAACTGAGTTTAAACTA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9UEW8	STE20/SPS1-related proline-alanine-rich protein kinase OS=Homo sapiens OX=9606 GN=STK39 PE=1 SV=3
Q9Z1W9	STE20/SPS1-related proline-alanine-rich protein kinase OS=Mus musculus OX=10090 GN=Stk39 PE=1 SV=1
O88506	STE20/SPS1-related proline-alanine-rich protein kinase OS=Rattus norvegicus OX=10116 GN=Stk39 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005360 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12202 all species →	OSR1_C	Oxidative-stress-responsive kinase 1 C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR047173 all species →	Family	STE20-related kinase adapter protein alpha/beta-like	Interproscan
IPR024678 all species →	Domain	Serine/threonine-protein kinase OSR1/WNK, CCT domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48014 all species →	SERINE/THREONINE-PROTEIN KINASE FRAY2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006611 all species →	Biological Process	protein export from nucleus	Interproscan
GO:0032147 all species →	Biological Process	activation of protein kinase activity	Interproscan
GO:0043539 all species →	Molecular Function	protein serine/threonine kinase activator activity	Interproscan
GO:1902554 all species →	Cellular Component	serine/threonine protein kinase complex	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for aint_s0086.g13.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.