Genomic Location: sc0000086_pilon:313909...360995
NR annotation: XP_015761562.1, PREDICTED: tetratricopeptide repeat protein 28-like [Acropora digitifera]
| CDS | ||||
| aint_s0086.g15.t1 | ||||
| Transcript |
| aint_s0086.g15.t1 |
| Protein |
| aint_s0086.g15.t1 |
| Uniprot term | Description |
|---|---|
| Q7LHG5 | Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2 |
| Q99315 | Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3 |
| Q80XJ3 | Tetratricopeptide repeat protein 28 OS=Mus musculus OX=10090 GN=Ttc28 PE=1 SV=3 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF17919 | RT_RNaseH_2 | RNase H-like domain found in reverse transcriptase | Domain | Interproscan |
| PF13424 | TPR_12 | Tetratricopeptide repeat | Repeat | Interproscan |
| PF12770 | CHAT | CHAT domain | Domain | Interproscan |
| PF13176 | TPR_7 | Tetratricopeptide repeat | Repeat | Interproscan |
| PF00078 | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR011990 | Homologous_superfamily | Tetratricopeptide-like helical domain superfamily | Interproscan |
| IPR019734 | Repeat | Tetratricopeptide repeat | Interproscan |
| IPR041577 | Domain | Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain | Interproscan |
| IPR043128 | Homologous_superfamily | Reverse transcriptase/Diguanylate cyclase domain | Interproscan |
| IPR052699 | Family | Regulatory & Mitotic Spindle Associated | Interproscan |
| IPR012337 | Homologous_superfamily | Ribonuclease H-like superfamily | Interproscan |
| IPR043502 | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR036397 | Homologous_superfamily | Ribonuclease H superfamily | Interproscan |
| IPR024983 | Domain | CHAT domain | Interproscan |
| IPR000477 | Domain | Reverse transcriptase domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10098 | RAPSYN-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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