Gene detail

Detailed information of aint_s0096.g22.t2 in Acropora intermedia

Genomic Location: sc0000096_pilon:422982...430015
NR annotation: XP_029190564.2, uncharacterized protein LOC114957329 isoform X1 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aint_s0096.g22.t2

aaaaaaCACGGAAAATGCGGAGATAGGATCGGAAGGTTCTGCTAAGCAAAACGAAGAATGGGCGGAAGAGTTTGAAAAATGAAGAAAATTGAAAATTGATTGAGAAGTTTTGGTAGAAGATAGAAGAAAAAGTGAAGTTATGTCCTTTTTACAAAGGGAGGAAGACCTGCGTTTCAAAATTATATTTGAAGCCGGGAGTTTTTCGAAACATATCAGCGAAATTTTCAGTCACTTGTTAACTGAACGAGTGAAGCTCAGCCATTGCGCAAGCGCAAATCGAGCAAATATGAATATTTGTCGATGCAGGTAAGACAGAGGGTACAATCTTCTTCTCAGGATCAATCTCTTTATCACAGATCTTCCACTCTCCGTAAAGCGGTAAGATGGGGGACCCTGGGAGCAAAATTGTGGACTGTACTTAATCCGTTTGAGAGCAGGATACACGTGCCCAGAAGGTTTGGGAAAGCTTTGTGATCCTGTTAATTGTGTCCAGCACTAAACGGAATTTTGCCATCTTGGCCCCAAAGGCAAGGGTGAGATCCTGGGAAAGAGGTTGCAGTTTTCTTCTATAGAAGTGAATTTGAGGAATTCAAACTAGGCTCTTGTACATATGATGATTTGAAATCAAGCATAAAAGTGCTCTTTTCGTGGATGGGTGTCTCACTGTATAGGAAAGAGCCCTCAACTTGAGTTATCTCACTGGAAGTTACCCTGTGACTTTTAAGCACCTACTGGGTGTTAAGACTTGCTCCGAATGGCTGTTAAGCAGAAGAGCATAGTATTCGTTAAATTTGCTTTGCTTTTGAGACGGGAATTTGTAGGAACAGGATTGGGTAAGTAATATTGGAAAGGAGTATTGATGCAACCCTTTGCTTCATTCGTGTTTGCAACTCTGATGGTTCCCCTCCCTGTGCCACATCAGCAACCGATGAGGCacaggccatttctgagttcagctcagcctcttttttaaagagagtctagttgagaagtctttgttgtgagtatccgtggtcattcatattgaaattagagctaattaccatcaaggtctcgcacttagactcgctttgaaagagagactacagggaacttggaaatggtttattTGCAGGCTCTTGGTTGAATAAAAAGTTCAAAACAACTTCAAGTTACAACTGCTTATTAACCTAGAATGGTTCATCGTGCTTAGGGGAAAGAAAAAGTAAAGCTTCAATACGCGATTCCACTGGAAAGGTCTCGAAGTGAATCCAGTGTTGAACAGTTTTTCGACTGACATGGGCCTCCTTTCGGACCCTTTTTTTTCTCTCTTGAAGTGGTCGAAAAATATCCGCCAAGCGCTCGGAAAAGAAACAACGAAGCCGAACCCTTATGGACTTCCTCGGGTAAGGTCCACCCCAAGTATGTCCCGAGGTGCGTACGTAACAGACACAAGGGCTCAATCGTTATGGCGAATGCTTCAGAAGGGTCCATCGATTTAGCCTCTCTTTTGAGGACGAATGAAGTGGAGGCACTTCATACGACGGTAATTTGTGCTCCTGGGAAATATCTTGTTTGGACAAGACTATCTAATGACAATTCATCCTGGATTATCAATGTTTCAGATGGAGTTGTTTTGTGGCAAACGTGCTTGGACCAGGACCACCTAGATTCACATAGAGAACTTGTTGAAAGCGATAAATATGAAACCTATTTTGCAAGATTCAAGTCAGATTTTCAGAGTGGTACCGTTTCAGTAACAAGGTTACCCAACAAAGTGACTTTAAATATTGGCACAAGGTTTCCATTGTTCAGCTTTGACTTATATGAAGTAAAGGATATTGAAAATAAAACAGAACTACAAAGAATCCTCTTCAGATTAGCTGATAGAGTCTCAGAACTCACTGACCAGTTGAAAGTACTATCAGATTCCTTGGAGAAAGTGAAGAACCAAAAGGATGGAGGTACAAGTGGATCATCAATATTTGATATCCCACTTAAGAAGTCCAACCAACCTCTACCTGCCAAACGCAAACAAGGCCACAGTCTCATTAATCCTGGAAGTAGAAAATTAAAACCAGCTAAAGGAGTCCAGTTTGATTAATTGCAACCATACAGCATCCTAGACAAACAGTGATTCAAATTATTAGCCTTGGGTCAAAGTTTCATATTCTGACCAAACTTTCAAAATTATTATTGTTTGTTTCAAGCGAAAATTATTTTTGTCTTCTTGTCCAAGCCTTTTTTCCCATGTACCTTACACATGTAATCACTTAGGTAATCTTTTTTTGGAAAACAATGGTTCATGATATGTAAAATACTTATGTTGTCTTAGAATAAAATTGAATTTTACTG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15384	PAXX	PAXX, PAralog of XRCC4 and XLF, also called C9orf142	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027873	Family	Protein PAXX	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR28586	PROTEIN PAXX	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006303	Biological Process	double-strand break repair via nonhomologous end joining	Interproscan
GO:0035861	Cellular Component	site of double-strand break	Interproscan
GO:0060090	Molecular Function	molecular adaptor activity	Interproscan
GO:0070419	Cellular Component	nonhomologous end joining complex	Interproscan