Detailed information of aint_s0099.g104.t1 in Acropora intermedia

Genomic Location: sc0000099_pilon:1326986...1344260
NR annotation: XP_044172810.1, elongator complex protein 2-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q05AM5Elongator complex protein 2 OS=Danio rerio OX=7955 GN=elp2 PE=2 SV=1
Q496Z0Elongator complex protein 2 OS=Rattus norvegicus OX=10116 GN=Elp2 PE=2 SV=1
Q91WG4Elongator complex protein 2 OS=Mus musculus OX=10090 GN=Elp2 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR037289FamilyElongator complex protein 2Interproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44111ELONGATOR COMPLEX PROTEIN 2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0002098Biological ProcesstRNA wobble uridine modificationInterproscan
GO:0033588Cellular Componentelongator holoenzyme complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11374ELP2; elongator complex protein 2-Transfer RNA biogenesisko03016deepkoala

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