Detailed information of aint_s0106.g50.t1 in Acropora intermedia

Genomic Location: sc0000106_pilon:570928...601805
NR annotation: XP_015771075.1, PREDICTED: protein NLRC5-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q80XI3Eukaryotic translation initiation factor 4 gamma 3 OS=Mus musculus OX=10090 GN=Eif4g3 PE=1 SV=2
O43432Eukaryotic translation initiation factor 4 gamma 3 OS=Homo sapiens OX=9606 GN=EIF4G3 PE=1 SV=2
Q04637Eukaryotic translation initiation factor 4 gamma 1 OS=Homo sapiens OX=9606 GN=EIF4G1 PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13516LRR_6Leucine Rich repeatRepeatInterproscan
PF02854MIF4GMIF4G domainRepeatInterproscan
PF20706GT4-conflictFamily 4 Glycosyltransferase in conflict systemsFamilyInterproscan
PF05729NACHTNACHT domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001611RepeatLeucine-rich repeatInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR003890DomainMIF4G-like, type 3Interproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR007111DomainNACHT nucleoside triphosphataseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46312NACHT DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan

TOP