Detailed information of aint_s0117.g5.t1 in Acropora intermedia

Genomic Location: sc0000117_pilon:88346...153077
NR annotation: XP_015777168.1, PREDICTED: protein NLRC3-like isoform X4 [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
C3VPR6Protein NLRC5 OS=Mus musculus OX=10090 GN=Nlrc5 PE=1 SV=2
Q86WI3Protein NLRC5 OS=Homo sapiens OX=9606 GN=NLRC5 PE=1 SV=3
P33076MHC class II transactivator OS=Homo sapiens OX=9606 GN=CIITA PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13516LRR_6Leucine Rich repeatRepeatInterproscan
PF20706GT4-conflictFamily 4 Glycosyltransferase in conflict systemsFamilyInterproscan
PF05729NACHTNACHT domainDomainInterproscan
PF08477RocRas of Complex, Roc, domain of DAPkinaseDomainInterproscan
PF00531DeathDeath domainDomainInterproscan
PF00791ZU5ZU5 domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000488DomainDeath domainInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR011029Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR020859DomainRoc domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR007111DomainNACHT nucleoside triphosphataseInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR000906DomainZU5 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46312NACHT DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0007165Biological Processsignal transductionInterproscan

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