Gene detail

Detailed information of aint_s0143.g27.t1 in Acropora intermedia

Genomic Location: sc0000143_pilon:587423...672451
NR annotation: XP_015765502.1, PREDICTED: phosphoglucomutase-2-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aint_s0143.g27.t1

ATCGAACGGTTGCAAGTTCTAGAGAAAGTGGATTGGATGAAAAGATATCAGAATGGTTGTCTTTAGACCAGCATCCAGATAGCATTGCAGAGGTCAATCAGCTTATCAAAGAAATGAAATTTGAGGAACTGAGAGCAATTATGATGTCACCGTTGTCATTTGGCACTGCAGGTCTGCGATCTAAAATGGGAGCAGGGTTCAGTAGGATTAATGATTTGACTATAATCCAAGCCACCCAGGGTCTCTGCAAATATCTGGAAAAGCTCTACCCAGATCTGAAGGAAAGAGGAGTTGTTGTGGGATATGATGCCAGGAACAACAGCAAAAGATTTGCCCAGAGAACTGGCAATGTATTTGCAAGTCAAGGAGTTCCAGTTTATCTGTTCAGTAAAATAACACCAACTCCATTTGTTCCATACTGTGTAAGAAGATACAAATGCATATGTGGTGTCATGGTAACAGCTTCTCACAATCCAAAAGATGACAATGGATATAAGGTTTACTTGGACAATGGAGCACAGATCAAGTCACCTCATGACAAGGGGATTTCACAGTGCATCAAAGAGAACAAACTTCCATGGCAAAACTCCTGGACACTTGATGACAGAAACCCTCTCATAAAGGATCCTTACAACAGAATTTGTTCTTTGTACTTTGAGGACATCAAACAGTATTCATTCTACAGAGATACAAACAGCAAAACAAGTTTAAAGTGTGTATTTACTCCAATGCATGGGGTTGGACAGAGATTTGTTGAGCTGGCATTTGAAGCTTTCAACCTGCCACCATTTATATCTGTTGCTGAACAGATGGTTCCGGACCCTAACTTTCCAACTGTCAGATATCCAAATCCAGAAGAAGGGAAGACTGCCTTGCACCTTGCTATGAAAACAGCTGATGAGAACTCTTGTAATGTCATTCTGGCAAATGACCCTGACTCTGACAGGATGGCTCTTGCAGAGAAACAACCAAGTGGTCAATGGAAGGTGTTCACTGGAAATGAAATAGGAATTTTATTTGGCTGGTGGGCATTCACGCATCACAAGAAACAGCATCCAGAGCTATATCCAGGTTCATCTGTGTACATGATTGCAAGCACAGTTTCAACAAAAATGCTTCAGTCCATGGCTAGAGAAGAAGGTTTCGTGTTTAAGGAAACCTTGACAGGCTTTAAGTGGATGGGAAACCTTGCCTTTGATCTTATGGCCCAAGGGAAAACGGTCCTGTTTTCATTTGAAGAAGCAATAGGGTTTATGTTTGGTACCATGGTCCTCGATAAAGATGGGATCAGTGCTGCAGTTGTCATGGCAGAAATGGCTTCTCATCTCAGGAGTCGTGGACTTACTTTAACACAGCAACTCGACAGTTTGTACAACAGATATGGTATTCACGTGTCCAACAATTCCTATTATCTTTGTTATTCTACATCAACTATAAAAAGTATTTTTGATCGCATCCGGACTCTTCAGGATGGTCAGTATCCCTCCACATGTGGTCCTTACAAGCTCTCTGCTATAAGGGACTTGACAGTTGGATATGACAGCACTGAGCCTGATTGCAAACCAGTTCTTCCTGTGAACAATTCCAGTCAAATGATCACCTTCTATTTTGAGAATGGCTGTGTCGCAACACTTCGCACGAGTGGTACTGAACCCAAGATCAAATATTATACAGAGCTTTCATGCAAGCCAGGTGAAAGGGATATTCCGTCTGCTAATAAAATACTTCAGGATGTTGTCAACAATATTGTAGAGGAGTATTTGCAGCCAAGTGTAAATCACCTAATTCCCAAAGAAGATTGAAGCTCCTGTAAAGAGAGATGATCGAATGTTGGTTGGTTTACTACTCAAGGCCAAGTATGGTGACATTTATCGTTAGAATGAGATGATGCCACTACTGATTTAAAGGGTGAAAGACGTCTGAAAGATAACAGGAAGTTACAATTTACGACACGAATAGACTCCCACTAGTCTGGACCTTGAATCTCTTTTTCTCAAACTGGAAAGCACTTGACTTCTGTCGACTGGCAAAGGGGTTTCATCTGGTTTTCACGGTCTTGCGTTAACCCTCGTCTTCTCAGTCAAGGGATTTGTGTGAATCTGGAAATCCGCAGAGTTAGTGATATTTGCTTTGTTACAGACGTCGGGTGGGCAAAGTGTCAATGAGAAAGTGACTTAAAGTCAGTTTGCTTTTCTGCAATCATCTTTTAAGATGCAGCCTACTGGGTGGGTTTTGTTTCTTATTTGGTTAGCAGAATGCTTGATTAAAGATCGTCACTTTTTAAGTTCAACGAGTGTAGAATTTGTGCTCTTTGGCGCTGTAAGAGTTTTTATTCCACCAACCCTCTAATACGTTACCAAGGATCCAAGGTGACCGCATAGCATcacagttaatagggtaatgggttaataggttatgaaacccattgttctatctttttgttcacttttttcaaccgtgaccctgcgcaaaacaaaaacatttttctgcatatattgaataataagccaatgaaaacgtttcgatcttgtcagttaagtgagaataaagcaaaagattgtgaagggttgaggtcctcctcaatatcaatgtttgcttctttgtaagccccttcgaagtttgccgagtttcataaccattgccatctattaaatatgATAGCATCGATGGTGGACAGTTTTCCCCTCATATGTAAACTGCGTAACTTGACGTAACAATGAAGTAGTTAATCTCTTCTAAACTGTGATACAGATTGAAGCGCCAAAAACAAAATTGACAGTGGCATTGAATGTTTAAGTTGAGATGAATTCTTTTCATGTACTTATGATGTAAGTGCTGTGACAACATACCCAGCAAATTTTTTACCTTTACTGAATTGGATTGTCCCTGAGTTTCAGAAATGAAAATATGTTGAAAGTGTTTATACATAAATAAATTGATTTGTGCTGCTGGAAGGTAGGAACAAGAGAGGGATACATTTCTTAAAATATTTAAAAGTCAGAAAAATCAGTAGTTGTGTTTTTTAGTGATCCCCATCAATGAGAGAAGGTCACTTTGAATGGGAGATTAAAATTATGGGCTATGA

Protein

Uniprot

Uniprot term	Description
Q5RFI8	Phosphopentomutase OS=Pongo abelii OX=9601 GN=PGM2 PE=2 SV=3
Q96G03	Phosphopentomutase OS=Homo sapiens OX=9606 GN=PGM2 PE=1 SV=4
Q7TSV4	Phosphopentomutase OS=Mus musculus OX=10090 GN=Pgm2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02880	PGM_PMM_III	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III	Domain	Interproscan
PF02879	PGM_PMM_II	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II	Domain	Interproscan
PF02878	PGM_PMM_I	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005846	Domain	Alpha-D-phosphohexomutase, alpha/beta/alpha domain III	Interproscan
IPR036900	Homologous_superfamily	Alpha-D-phosphohexomutase, C-terminal domain superfamily	Interproscan
IPR005845	Domain	Alpha-D-phosphohexomutase, alpha/beta/alpha domain II	Interproscan
IPR016055	Homologous_superfamily	Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III	Interproscan
IPR016066	Conserved_site	Alpha-D-phosphohexomutase, conserved site	Interproscan
IPR005844	Domain	Alpha-D-phosphohexomutase, alpha/beta/alpha domain I	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45745	PHOSPHOMANNOMUTASE 45A	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005975	Biological Process	carbohydrate metabolic process	Interproscan
GO:0016868	Molecular Function	intramolecular phosphotransferase activity	Interproscan
GO:0071704	Biological Process	obsolete organic substance metabolic process	Interproscan
GO:0000287	Molecular Function	magnesium ion binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006166	Biological Process	purine ribonucleoside salvage	Interproscan
GO:0008973	Molecular Function	phosphopentomutase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K15779	PGM2; phosphoglucomutase / phosphopentomutase	EC:5.4.2.2 EC:5.4.2.7	Purine metabolism	ko00230	deepkoala