Detailed information of aint_s0144.g26.t1 in Acropora intermedia

Genomic Location: sc0000144_pilon:325726...352360
NR annotation: XP_015748270.1, PREDICTED: protein NLRC3-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
C3VPR6Protein NLRC5 OS=Mus musculus OX=10090 GN=Nlrc5 PE=1 SV=2
Q86WI3Protein NLRC5 OS=Homo sapiens OX=9606 GN=NLRC5 PE=1 SV=3
Q9C000NACHT, LRR and PYD domains-containing protein 1 OS=Homo sapiens OX=9606 GN=NLRP1 PE=1 SV=1
Gene familySubfamily
Transcription Factors FamilyTHAP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02017CIDE-NCIDE-N domainDomainInterproscan
PF05729NACHTNACHT domainDomainInterproscan
PF13359DDE_Tnp_4DDE superfamily endonucleaseDomainInterproscan
PF13516LRR_6Leucine Rich repeatRepeatInterproscan
PF05485THAPTHAP domainDomainInterproscan
PF20706GT4-conflictFamily 4 Glycosyltransferase in conflict systemsFamilyInterproscan
PF13613HTH_Tnp_4Helix-turn-helix of DDE superfamily endonucleaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR007111DomainNACHT nucleoside triphosphataseInterproscan
IPR003508DomainCIDE-N domainInterproscan
IPR051261FamilyNOD-like receptor (NLR)Interproscan
IPR006612DomainTHAP-type zinc fingerInterproscan
IPR027806DomainHarbinger transposase-derived nuclease domainInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR027805DomainTransposase, Helix-turn-helix domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24106NACHT, LRR AND CARD DOMAINS-CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0006915Biological Processapoptotic processInterproscan
GO:0035556Biological Processintracellular signal transductionInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

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