Detailed information of aint_s0168.g18.t1 in Acropora intermedia

Genomic Location: sc0000168_pilon:357466...369320
NR annotation: XP_015778390.1, PREDICTED: neurogenic locus notch homolog protein 1-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9R172Neurogenic locus notch homolog protein 3 OS=Rattus norvegicus OX=10116 GN=Notch3 PE=2 SV=2
Q61982Neurogenic locus notch homolog protein 3 OS=Mus musculus OX=10090 GN=Notch3 PE=1 SV=1
Q04721Neurogenic locus notch homolog protein 2 OS=Homo sapiens OX=9606 GN=NOTCH2 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06816NODNOTCH proteinFamilyInterproscan
PF00066NotchLNR domainDomainInterproscan
PF07684NODPNOTCH proteinFamilyInterproscan
PF00008EGFEGF-like domainDomainInterproscan
PF12661hEGFHuman growth factor-like EGFDomainInterproscan
PF00023AnkAnkyrin repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR000800DomainNotch domainInterproscan
IPR035993Homologous_superfamilyNotch-like domain superfamilyInterproscan
IPR010660DomainNotch, NOD domainInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR011656DomainNotch, NODP domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR050906FamilyNotch signaling pathwayInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24044NOTCH LIGAND FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0030154Biological Processcell differentiationInterproscan
GO:0007219Biological ProcessNotch signaling pathwayInterproscan
GO:0007275Biological Processmulticellular organism developmentInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005112Molecular FunctionNotch bindingInterproscan

TOP