Detailed information of aint_s0169.g27.t2 in Acropora intermedia

Genomic Location: sc0000169_pilon:314666...356875
NR annotation: XP_029212498.2, laminin subunit alpha-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q00174Laminin subunit alpha OS=Drosophila melanogaster OX=7227 GN=LanA PE=1 SV=2
Q61789Laminin subunit alpha-3 OS=Mus musculus OX=10090 GN=Lama3 PE=1 SV=4
O15230Laminin subunit alpha-5 OS=Homo sapiens OX=9606 GN=LAMA5 PE=1 SV=8

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02210Laminin_G_2Laminin G domainDomainInterproscan
PF00055Laminin_NLaminin N-terminal (Domain VI)DomainInterproscan
PF00054Laminin_G_1Laminin G domainDomainInterproscan
PF00052Laminin_BLaminin B (Domain IV)DomainInterproscan
PF00053Laminin_EGFLaminin EGF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001791DomainLaminin G domainInterproscan
IPR002049DomainLaminin-type EGF domainInterproscan
IPR008211DomainLaminin, N-terminalInterproscan
IPR000034DomainLaminin IVInterproscan
IPR001368DomainTNFR/NGFR cysteine-rich regionInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR050440FamilyLaminin/Netrin Extracellular MatrixInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10574NETRIN/LAMININ-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0009887Biological Processanimal organ morphogenesisInterproscan
GO:0009888Biological Processtissue developmentInterproscan

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