Detailed information of aint_s0190.g4.t1 in Acropora intermedia

Genomic Location: sc0000190_pilon:162216...203847
NR annotation: XP_044163735.1, nucleotide-binding oligomerization domain-containing protein 2-like isoform X3 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05729NACHTNACHT domainDomainInterproscan
PF13965SID-1_RNA_chandsRNA-gated channel SID-1FamilyInterproscan
PF18738HEPN_DZIP3DZIP3/ hRUL138-like HEPNDomainInterproscan
PF13516LRR_6Leucine Rich repeatRepeatInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR007111DomainNACHT nucleoside triphosphataseInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR025958FamilySID1 transmembrane familyInterproscan
IPR041249DomainDZIP3-like HEPN domainInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46844SLR5058 PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

TOP