Gene detail

Detailed information of aint_s0192.g28.t1 in Acropora intermedia

Genomic Location: sc0000192_pilon:342785...356785
NR annotation: XP_029185916.2, 5-aminolevulinate synthase, nonspecific, mitochondrial-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aint_s0192.g28.t1

CATGAGCATGCTTGACAGGAAAAGAGAGCTAACATTTACAGCCGAGAAGGAAATTCTTTCTTAAAGTATTCGTGCTCCAAATCTCGAAAAATGTTAAGACTGAAAAATTAATGTCATGTTATTTTCTTTCAGAAACTGAAAATGAGAAATATGTCAATACATATTTCAGAAATTTAAAACAACGGCAAAATTACCAGAATGGAAAGTCATGCACGACAGATGAAACACCATATTTGTGAATGCAGTATCACTCCATGAAAACATCTACTGTCGCAAGGCATAACACTTTGAGGTGTCAAAGCTATCATTCCTTTTATCAGAGAAGTCGTTTTAGCAACGGAATTTGCAAAAAAATGCCCGTTTTTGGCGCGTTTTCCTTCTTCTTTCGTCCGTAAGACAGGGATGCCCTTATTGGTATCCTGTTCTGAAGGTTGCCTCGTGATGTCCGACGTTTTGAGCAAACAGGGTGAAACCTTTGTTTGATGGTCATTTTGTCAAGTGAAGCAGGCTTCTTCCACGAGTTCCATAAGTTAGTGTTGCATCTTTTTCACTTCAGTGGTCTTCTCGCAAGAATCTAGGAAACTGTCAACATTCAACATACACAGGGTTCTCCACTGTGCCAACAACATTTCTATTCTTTGCAGAATACACTCTTGCCAGAACGTGCCATGCACCTTGATTTTGGTGTCCATTCACCAAACAACAAAAACAACGACCATTCTCCATGCTGAACTCTTCCTGTCCACATTCGATGGTCGTCGATAGTGCACTCCCTGCTATTTCTCGTAGTGCTTAACCCTTTTCAGTCCTCTCTCTTTTTTGGGTCGACGGCTTCTAGTCTTGCCATACTCACCATTTTCTTCTATAGCTGTGTCCGACGTTTTCAATTTTTAATTCCAGCCATCATATTAGGGATTTGAAGTTGACCTCGTCATTTTTCAGAAGACACCAGCCAGGACTTGTACCCTTGTATACGTTTACCCCGCATAACTTGTATTTCGTAATTACAGCCATTCTCCATTTGGACCACTCATCGAACCACAACTGAACCGTGGTCGAGAACAGCTGAAAATCCTTCCGTATCGAAATTCCTGGTGTGAAATTTCTACAAGTTCAAAGTGTACTCAGATTTTGTTTAACATAAAGCGTCATTTGCCTGAAAACTTGTTTGCTATAGCTTTTCCGGCTTTGCTTGAAGATTTCCCGGCTGACTGTATTGTCGTCCACTCTTTGTCACTCGACTGGAGACTTATAGGTTACTTTGTGTTGGATATAGAATGTCAGGAAGATAGAGAGGAAGCTGTTTCCACGAAGATACATAATTTGCAGAAGAATTACAAACCGTGGCCTTGCCTCTGCCCAATTGGAATTTTGGATCTTCAAGGATAGTACTCATTTCGTCTGGTGTTCTTTGCAAACGCTTTCTTCCAACTTTCGTTTGTTGAACGCTTTTTTGATGTGCTGTCGAATTTCGCTCATCTTTTCAGTGGCCCAGTGAAATTTAATCAGTCGTTGCAATCGATGAAAACCTTTATCCAACGACAATTctttgttttaagaatgtactttacaagaacattgaggctgaaatttccgacatttcaagaatatttcgtggatgaaccgaggctgttatttcatgtttttgcgtgttgaagatccgtaaaatacaaccaaatctatttagATGTAAAAATGTAAAACAACTGCAGCGAAATCCAGAATAGAAAGATCCACAACAGATGAAACACCATATTTGGTCATTATCTCCTTTTTCGGAAATTAAGCCGGGGTATATATAGTGCTCTCATGTCCCCCACCAGTTATGTGAATGCAGTGTCATTCCGTGTAAACATCTTCCGTGAGAAGCCATAAAACAACTCGTTTAACACTTTAAAGCGTCAAAGCTTTACTTCTTTTTATCAGAGAATCGCTCGAACTCGTTTTAGCAATGGAACTTGCGAAAAAATGCCCGTTTTTAGCGCGGGTTCCTTCTTCTTTCGTCCGTAAGGCAAGAGGACCAGTATTGGTGTCGTACGCTGAACGTTGCCCCGTGATGTCCGACGTTTTGAGCAAACAGGGCGAAATCCCGCAGAAAAATGATGGAGCTAAAACCATCGGAGTTTCCACCACTGCCAAAGCTGGAAAATGCCCTTTCAGCCAAAATGCAGCAGTCGCAGATGCTGATGTCAAATCCAATGAGTTTGCTGGCTGTGCTTGTGACTACAAGGAAGGGGCCCCACGCAAGGAGTCATCCGTTCCAGCTGATGGAAAGTGCCCCTTCTCAAGCGGAAAGCCCGTTGTGGATGCTTTGCAGATGCTCCATCCCACCCCAGCCATGAAAGCAGGAAGTGTTCTGTCGCAGCCTACTGGTGTGCGTCAGTTGGTGACAATGCCTCTTAGTGCACAAGCACCTGCTCCAAGCCTTCAGAATTTTAGTTCCCATTTTGACTATGAAGAATTTTTCATGAGTGAGGTCGAGAAGAAGAAGAAGGATGACACTTACCGAATTTTCAAGAAAGTAAATCGTTTGGCTGAGTCATTCCCACATGCTTTGGACTACAGTAACACCATGGAAGGCAAAGATGTGACAGTCTGGTGCAGCAATGATTATCTTGGAATGAGCCGTCACCCTGAGGTGTTGAAAACTGCCATGGAGACCATTGAAAAGCATGGTGTTGGTGCAGGAGGGACCAGGAACATCTCTGGAACCAGCAGCTACCATGAAGGTTTGGAAAAGACACTTGCACAGCTGCATAACAAGGAAGCTGCCTTGATATTTACCTCCTGCTATGTAGCCAATGATACCACACTGTTTACATTGGCACGACAGTTACCAGGTTGCCTTATTTTCTCTGATGCTGGAAACCATGCTTCAATGATTCAAGGCATACGAAACAGCGGAGCAAAGAAGTACATCTTTCGTCATAATGACGTGGAACATCTGGAGCAGTTGTTGCAGCAAGCAGACCCTGATGTCCCCAAGATCGTGGCCTTTGAAACTGTGCATTCGATGACAGGCGATGTGTGTCCATTGGAAGAGCTGTGCGATGTTGCGCACAAGTATGGAGCTCTGACGTTTGTGGATGAGGTCCATGCTGTTGGCCTGTACGGTCACAGTGGTGCAGGAATTGGTGACCGCGATGGTGTTCTGGACAAGATGGACATCATCAGTGGTACTCTTGGCAAAGCATTTGGTGTGATTGGCGGGTACATCGCTGCAACGGCAGCTCTGGTGGACAACATCCGCAGTTATGGATCTGGCTTCATCTTCACCACTTCCTTGCCTCCGGTTACAGTCAATTCAGCTATTACATCCATCGGTATCCTAGCCAGCGAAGAAGGCCGCCAGTTGCGAAGCAAACACCAGAGTGTTGTTCGCACTTTGAGGAACAAACTTGTCAGTGCTGGACTGCCTGTGGTGTATGCACCAAGCCACATCATCCCTGTGCATGTTGGTGATGCAGCAAAGTGCACCGCCATTTGCAATGAGATGCTTTCCAAGCATGGCATGTACGTGCAGTCAATCAACTATCCTACCGTGGAACGTGGAAAAGAACGCCTGCGTATCGCTCCTACTCCCAAGCACGACGAGGCAATGATGGACAAGTTCACTGATGCTCTCGTCCAGGCGTGGAAGAACCAAGGCATGGAATTCTTGACTCCTGTGTGCACTGCAGAGTGTGACTGTCAGGATCGCTGCGTCACTTACAAGGAGCTGGAATGCAACAAGTATGCGTCCCAGGTCTTGGCGGCCTAAACCAACAGGAACCAACCCGAGTCCATGCTCTAATGCGTCTGCGTTGTTTGAATTTCTTATTAATGTAATGGGAAGAAATATTGTGGAATTAGCCGAGTTTATAGTGGAATTAGCCGAGTTTTTAACAAGAATAAAAATTGATTCAAGTG

Protein

Uniprot

Uniprot term	Description
A6QLI6	5-aminolevulinate synthase, non-specific, mitochondrial OS=Bos taurus OX=9913 GN=ALAS1 PE=2 SV=1
P13195	5-aminolevulinate synthase, non-specific, mitochondrial OS=Rattus norvegicus OX=10116 GN=Alas1 PE=2 SV=2
P13196	5-aminolevulinate synthase, non-specific, mitochondrial OS=Homo sapiens OX=9606 GN=ALAS1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00155	Aminotran_1_2	Aminotransferase class I and II	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004839	Domain	Aminotransferase, class I/classII	Interproscan
IPR010961	Domain	Tetrapyrrole biosynthesis, 5-aminolevulinic acid synthase	Interproscan
IPR050087	Family	8-amino-7-oxononanoate synthase class-II	Interproscan
IPR015422	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, small domain	Interproscan
IPR015424	Homologous_superfamily	Pyridoxal phosphate-dependent transferase	Interproscan
IPR001917	Binding_site	Aminotransferase, class-II, pyridoxal-phosphate binding site	Interproscan
IPR015421	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, major domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13693	CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0009058	Biological Process	biosynthetic process	Interproscan
GO:0030170	Molecular Function	pyridoxal phosphate binding	Interproscan
GO:0003870	Molecular Function	5-aminolevulinate synthase activity	Interproscan
GO:0033014	Biological Process	tetrapyrrole biosynthetic process	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0006783	Biological Process	heme biosynthetic process	Interproscan
GO:0016740	Molecular Function	transferase activity	Interproscan