Gene detail

Detailed information of aint_s0194.g14.t1 in Acropora intermedia

Genomic Location: sc0000194_pilon:301066...316666
NR annotation: XP_015750885.1, PREDICTED: lysophosphatidylcholine acyltransferase 2-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aint_s0194.g14.t1

GTGAAAAGAGCTTTACGAGGATGACGTAAATTGCGATGACCATCTTCAAAAACATTACCAATATTTACTAAGCTGTTGTTACTCGTGAAAATAATCATAACAAAAAAAAGTGCACTCGTTAACGATTATTGCAAGCAGCCTCAAGGCTTGAAATTTTAGGTTCAGGATGTCGGAGTTTCCCAAAAGAAGAGTTCTTTTAAGAGCTAAATCGTTCATTCAACCCGAGGTTCACAACCCGTTCACGCATCGACTCCAGCTTACAATTTGGGATAAGCTGAAAGTTGCAGTGTTAAGTTTCACTCTTTTCCCAATAAGGCTTCTTTGTCTGTCTCTGCTCTTGTTGCTGGCTAGTTTTCTTTCAACACTCACAACAGCATGCATGAAAAAGGAGGAAGTACCACAGCCGTTGTCAGGGATACGAAGGATATTAAGGAAACCCTTGCGAGGTGTTGGAAGAGCAATGCTGTTCTGCATGGGTTTTCATTGGGTGAAAGTAAAAGGCAAACTAAGCAAATCTGAAGAGGCCCCAATTCTTACAATAGCTCCTCATTCATCATTCATTGATGCGCTGGCTTTGGCTGTCATTTGCCTTCCTTCAGGTGTTTCACGGGAAGAGAATGATTCAATACCACTCTTAGGAGCTTGTATACGTGCAACCCAGCCTGTTTATGTAAGAAGAGGAGATAAGAATTCAAGAAAGCAGACAATTTATGAAATAAAAAGGCGAGCTAATTCAGGTGGAAAGTGGCCACACATTGTGATATTTCCAGAAGGTACTTGCACTAATCGAAAGTGCCTGATCACTTTCAAACCAGGTGCTTTTTACACTGGCTGCCCCGTGCAACCAGTTGCCATCAGATACCCCAACAGATTGGACACTGTAACATGGACTTGGTCTGGACCAAGTGCGTTTACCCTATTTTGGCTAACATTATGCCAGGTTAACAACAACATGGAAATAGAGTTACTACCAGTCTATAAACCTGACACAGAGGAAATCCATGATGGAAAACTTTTTGCGAGGAATGTTCGGGAGCAAGTTGCCAAAGTTTTAAATGTTCCAGTGACAGAACACTCTTATGAAGATACACGGCTAATGGTTCAAGCATCAAAACAGAATCTACCTTCCAGTGTTGGATTGATAGAATATGAAAAAATAAGCACAAAATTAAGTATCAAACTTGACAGTATGAAAGAGTTGTTAAGCAGATTTGCAGAGATAGACACTGACAAGGATGGACTGGTAAATGTTCAGGAGTTTGCACAGTACCTCAACCTACCTCTCACCCACAATGTCAAACGTATCTTCTCTCTTTATGACAGGGATAACTCTGGTTTTCTTGATTTTCGAGAGTACCTGATTGGCTTGGCCTTAGTCTCCCAACCAGCTAACACTGATAAAGTGATGCAAGTGGCCTTCCAAGCCTTCGACATGAATGGTGATGGAAGAGTTGAAGAAAGTGAGCTGCGTCATATACTTCAGAGTGCACATCCGTCCATAACCGACCTGGATGTCAACTGTTTGTTTAATCAGGTAGATTCAAAGCGCAAAGGATCTGTAACTTTCGAGGAGTTCCATGAGTTCGCAGTGTCTCATCCAGAGTATGGAGCCTTGTTTGCTCACCAGGAAATACAATCTAAGAGTGCAAGCAGTGAATCAGACCAGGGACATGAAATCAAAGTGTGAATATGCATGTAACTTAGGGTTTTGCTAAAAGCAGGTCCGCGGCCCACGGCCCGGCGGCCCGAAGAaaaagaatttgcccgtttctgcacttctcacttccaggcttgctacggtgcgatcaataatttcggaaagctcgggataaaggagaaccttgctgaaaaactgaaacaaattggacaaatcgaagtaactccagattgtgaagaagtccgaggtacgaaaatttccaggaaatactttaggaaagttacagtcctagtaaatggtgtgaaaaaatcaacgacagcttcaataatggacttttgctctgttttcaatttgaaatcgctgtcttttccagctttagtcaaagcgaaatccaacgcctcgctaaataacgaggccattttctaatttcctgttttctctaagagcatgcgccgtgaagtccaaatagccagattttggctaaacccctgcagagtttcccagagcttgcgcgaagaaagcagcgtaagcactggggtcgagaacTgcccaaaccagatgcaaatctgtgcatgcgcgtggatttaccgctggacaaaaaattgtggaaaatcaggactgggccgccgtgggccttcgggccgctgggccTGCTTTTATCAAACCTTGTGCGCAGCAAAAAAAACATGGCCAGGAGACCAAAGGGAAGAGTTAACTGAAAACTATGATGCCTAATTGTAAGCAGAACGTGAACACTCTGTCACCAACTATAAAACCCAATGTTAAAGATAAAGTTTAAGAGTAAGGGAAATTGAAACCAAGCTGTCTTTTTTATTTAAAACTTTCAAATATTTAAAATTTTTTCAGCTGTACTTAATTGATTCTTGAAACACAGAAAAGTAAGGGCAGCCAGACAGGCAAGGTTTGTCAAAGGGGTGTTCTCTCCTCGATCTCCGCACCTTTCATACATCGACCCTGTTAAAACGTAACGTAACCAACTTGGTCAAGCCAAATCATCTTTCATGGGAGAAACGTATGACTGAAATGTCTCAAATTTCGGTTCATTTATTTTTGAAATAAAGGATATTAAATGGC

Protein

Uniprot

Uniprot term	Description
Q8BYI6	Lysophosphatidylcholine acyltransferase 2 OS=Mus musculus OX=10090 GN=Lpcat2 PE=1 SV=1
Q7L5N7	Lysophosphatidylcholine acyltransferase 2 OS=Homo sapiens OX=9606 GN=LPCAT2 PE=1 SV=1
Q4V8A1	Lysophosphatidylcholine acyltransferase 2B OS=Rattus norvegicus OX=10116 GN=Lpcat2b PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13499	EF-hand_7	EF-hand domain pair	Domain	Interproscan
PF13202	EF-hand_5	EF hand	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR002048	Domain	EF-hand domain	Interproscan
IPR015757	Family	Calcineurin B protein	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45942	PROTEIN PHOSPATASE 3 REGULATORY SUBUNIT B ALPHA ISOFORM TYPE 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005955	Cellular Component	calcineurin complex	Interproscan
GO:0006470	Biological Process	protein dephosphorylation	Interproscan
GO:0008597	Molecular Function	calcium-dependent protein serine/threonine phosphatase regulator activity	Interproscan
GO:0019902	Molecular Function	phosphatase binding	Interproscan
GO:0097720	Biological Process	calcineurin-mediated signaling	Interproscan