Detailed information of aint_s0233.g39.t1 in Acropora intermedia

Genomic Location: sc0000233_pilon:356307...366995
NR annotation: XP_029202204.1, DNA damage-binding protein 1-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q3U1J4DNA damage-binding protein 1 OS=Mus musculus OX=10090 GN=Ddb1 PE=1 SV=2
A1A4K3DNA damage-binding protein 1 OS=Bos taurus OX=9913 GN=DDB1 PE=1 SV=1
P33194DNA damage-binding protein 1 OS=Chlorocebus aethiops OX=9534 GN=DDB1 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DDB1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03178CPSF_ACPSF A subunit regionRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050358FamilyRSE1/DDB1/CFT1/CPSF1Interproscan
IPR004871DomainCleavage/polyadenylation specificity factor, A subunit, C-terminalInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10644DNA REPAIR/RNA PROCESSING CPSF FAMILYInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0035861Cellular Componentsite of double-strand breakInterproscan
GO:0043161Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10610DDB1; DNA damage-binding protein 1-DNA repair and recombination proteinsko03400deepkoala

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