Detailed information of aint_s0252.g13.t1 in Acropora intermedia

Genomic Location: sc0000252_pilon:86786...104648
NR annotation: XP_044180450.1, U2 snRNP-associated SURP motif-containing protein-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5R7X2U2 snRNP-associated SURP motif-containing protein OS=Pongo abelii OX=9601 GN=U2SURP PE=2 SV=1
O15042U2 snRNP-associated SURP motif-containing protein OS=Homo sapiens OX=9606 GN=U2SURP PE=1 SV=2
Q6NV83U2 snRNP-associated SURP motif-containing protein OS=Mus musculus OX=10090 GN=U2surp PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04818CIDCID domainRepeatInterproscan
PF08312cwf21cwf21 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006569DomainCID domainInterproscan
IPR051485FamilySR-related and CTD-associated factorInterproscan
IPR013170DomainmRNA splicing factor Cwf21 domainInterproscan
IPR035967Homologous_superfamilySWAP/Surp superfamilyInterproscan
IPR008942Homologous_superfamilyENTH/VHSInterproscan
IPR047488DomainU2-associated protein SR140, cwf21 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23140RNA PROCESSING PROTEIN LD23810PInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006396Biological ProcessRNA processingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12842SR140; U2-associated protein SR140-Spliceosomeko03041deepkoala

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