Detailed information of aint_s0254.g11.t1 in Acropora intermedia

Genomic Location: sc0000254_pilon:136276...140127
NR annotation: XP_044176732.1, uncharacterized protein LOC114969848 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P20965Polyadenylate-binding protein 1-A OS=Xenopus laevis OX=8355 GN=pabpc1-a PE=1 SV=3
Q6IP09Polyadenylate-binding protein 1-B OS=Xenopus laevis OX=8355 GN=pabpc1-b PE=2 SV=1
P29341Polyadenylate-binding protein 1 OS=Mus musculus OX=10090 GN=Pabpc1 PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00658PABPPoly-adenylate binding protein, unique domainFamilyInterproscan
PF00097zf-C3HC4Zinc finger, C3HC4 type (RING finger)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001841DomainZinc finger, RING-typeInterproscan
IPR002004DomainPolyadenylate-binding protein/Hyperplastic disc proteinInterproscan
IPR036053Homologous_superfamilyPABC (PABP) domainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR018957DomainZinc finger, C3HC4 RING-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46276E3 UBIQUITIN-PROTEIN LIGASE UBR5Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0034450Molecular Functionubiquitin-ubiquitin ligase activityInterproscan
GO:0090263Biological Processpositive regulation of canonical Wnt signaling pathwayInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan

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