Detailed information of aint_s0267.g30.t1 in Acropora intermedia

Genomic Location: sc0000267_pilon:279752...285235
NR annotation: XP_015764982.1, PREDICTED: uncharacterized protein LOC107343908 isoform X1 [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q99MU3Double-stranded RNA-specific adenosine deaminase OS=Mus musculus OX=10090 GN=Adar PE=1 SV=2
P55266Double-stranded RNA-specific adenosine deaminase OS=Rattus norvegicus OX=10116 GN=Adar PE=1 SV=1
P55265Double-stranded RNA-specific adenosine deaminase OS=Homo sapiens OX=9606 GN=ADAR PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00035dsrmDouble-stranded RNA binding motifDomainInterproscan
PF02295z-alphaAdenosine deaminase z-alpha domainDomainInterproscan
PF02137A_deaminAdenosine-deaminase (editase) domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014720DomainDouble-stranded RNA-binding domainInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR002466DomainAdenosine deaminase/editaseInterproscan
IPR042371DomainZ-binding domainInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10910EUKARYOTE SPECIFIC DSRNA BINDING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004000Molecular Functionadenosine deaminase activityInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0003725Molecular Functiondouble-stranded RNA bindingInterproscan
GO:0003726Molecular Functiondouble-stranded RNA adenosine deaminase activityInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006382Biological Processadenosine to inosine editingInterproscan
GO:0008251Molecular FunctiontRNA-specific adenosine deaminase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12968ADAR, ADAR1; double-stranded RNA-specific adenosine deaminaseEC:3.5.4.37
Spliceosomeko03041deepkoala

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