Genomic Location: sc0000269_pilon:442577...476322
NR annotation: XP_015764881.1, PREDICTED: nephrocystin-3-like [Acropora digitifera]
| CDS | |||||
| aint_s0269.g10.t1 | |||||
| Transcript |
| aint_s0269.g10.t1 |
| Protein |
| aint_s0269.g10.t1 |
| Uniprot term | Description |
|---|---|
| Q7Z494 | Nephrocystin-3 OS=Homo sapiens OX=9606 GN=NPHP3 PE=1 SV=1 |
| A0JM23 | Nephrocystin-3 OS=Xenopus tropicalis OX=8364 GN=nphp3 PE=2 SV=2 |
| Q7TNH6 | Nephrocystin-3 OS=Mus musculus OX=10090 GN=Nphp3 PE=1 SV=2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13424 | TPR_12 | Tetratricopeptide repeat | Repeat | Interproscan |
| PF13374 | TPR_10 | Tetratricopeptide repeat | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR011990 | Homologous_superfamily | Tetratricopeptide-like helical domain superfamily | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR051191 | Family | DDB1-CUL4-associated factor 12 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR19860 | DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0080008 | Cellular Component | Cul4-RING E3 ubiquitin ligase complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K24944 | TTC41; tetratricopeptide repeat protein 41 | - | Domain-containing proteins not elsewhere classified | ko04990 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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