Genomic Location: sc0000292_pilon:11726...19945
NR annotation: XP_015769319.1, PREDICTED: protein NRDE2 homolog [Acropora digitifera]
| CDS | |||||
| aint_s0292.g2.t1 | |||||
| Transcript |
| aint_s0292.g2.t1 |
| Protein |
| aint_s0292.g2.t1 |
| Uniprot term | Description |
|---|---|
| Q80XC6 | Nuclear exosome regulator NRDE2 OS=Mus musculus OX=10090 GN=Nrde2 PE=1 SV=3 |
| Q9H7Z3 | Nuclear exosome regulator NRDE2 OS=Homo sapiens OX=9606 GN=NRDE2 PE=1 SV=3 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF08424 | NRDE-2 | NRDE-2, necessary for RNA interference | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR011990 | Homologous_superfamily | Tetratricopeptide-like helical domain superfamily | Interproscan |
| IPR013633 | Family | siRNA-mediated silencing protein NRDE-2 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13471 | TETRATRICOPEPTIDE-LIKE HELICAL | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0031048 | Biological Process | regulatory ncRNA-mediated heterochromatin formation | Interproscan |
| GO:0071013 | Cellular Component | catalytic step 2 spliceosome | Interproscan |
| GO:1902369 | Biological Process | negative regulation of RNA catabolic process | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K26109 | NRDE2; nuclear exosome regulator NRDE2 | - | Messenger RNA biogenesis | ko03019 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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