Gene detail

Detailed information of aint_s0303.g3.t1 in Acropora intermedia

Genomic Location: sc0000303_pilon:25816...41357
NR annotation: XP_015759109.1, PREDICTED: fidgetin-like protein 1 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aint_s0303.g3.t1

AAACAGCACAGTACTTGGGGTGCCTGTGAGAACCAACTCGACCCAATCTCTTACTCTTTTACCGCCAATTTAATCAGAACGCGCGCAGAGAGGATTTCCCTTTCCTGTATCTTAAGCTTGCGATTCTGTTATCTTGAAAGTCATCATTCCTGAAAATTTAGAGATGCATCTTTCACACGATGACTCTTATGCGCTTAACATGTGGCAGAGATTGTTCTTTGAAGCTGAATCATCGACAAATTCGCACAGTAGAGCGAACGCCTGGCGAAGATTGCTGATTCAAGCTGGTGCTATGAAAAAAAGTAACGAAATATCCCTTGAGCTGTACAACCGGTTATTACAGAGGTTGGCGACTAACTACCATCAAATCGCTGATGATCAGAAACCAGATCAAGGTTTAAACAATTATGCTGAAACAGTGCTAACTCTTGCATCTGGTTGCCGAAATGAGAGTCGCAACTGGAGCTCTGGTTTGTCCTTGAGCAGTGTACATTCCATTCCTGTATACACTTCTCTCTTAGAATCCAAGAGAGAACTACACACAAATAGACCTCCTCAGAGCAACAGTTTTAACAAGAATGATCCAAAGAGGACATCTATTCACCCCTCATCGTTAGAAACCAAAGCATTGGATGAAGAGAACAAACCTAATGACAACAACTTGGTTTCAGCTGGATCTAGTCCTGATGATGCAGCTGATACCAGTTTGCATTTAAGTGTCCATGGTGACAAAAAATGTACACATGATTGTAAGGCAGAAATTCCTCCTGCTCATCAATTCATGGCTGCTGAACAGTTGGCAACTGTCCTTCAATTCCAAGTTCCGGAAAGAGCAACAAATGTGCAGGGAAATGAAGTGTCAAGAGAAATCAAGCAAGAGAATATAAGTGTATTTTCAAACCAAAATGGTCCTAGTGTAACAGGAAATGCTGCTGGAATTAAACGAAAAGCACCAAGTGATTGTCCAGGAACCACAGGACCTGGACTTCACAACACAATATTTCAATCTTTTCATGATCAGGGATTTGCGGATAAAAGGATTCTGAAGAAGACTTTAGAGAAACAGAGCTGCACAGATATTCATGAAGAAACCAGTGCTATGCCAAGTTTTATCACTGCTAGGCAACAACTGGTATTGAATTCTAAAAAGAAGAACTATCATCATGACAGTGATCCAAAGGCAAGCAGACAGGGTTCAATAAACTGCACAAACTACGGAAACACGAGGAAAACTCTAGGAACAAGGCGCGGGCCAAGTCGACAGTTTATTCCACCTATTTTGAATCAGGATAACAATGAAGGATTAGAAAGGGAATTAAGAAATGATAGAACTAGAGAAGATCCATGTGTGGATGAGAGACTGAAAAACATTGACCAAAAAATGATTGAGCTTATTACAAATGAGATTATGGATCATGGTCCACCATTATCTTGGGATGATATTGCAGGGTTGGAATTTGCAAAGAGTGTCATCAAAGAGATCGTTGTCTGGCCCATGCTCAGACCGGACATCTTTAAAGGTCTCAGAGGCCCACCCAAAGGAGTTCTCTTATTTGGCCCTCCAGGAACAGGGAAGACCTTGATTGGGAAATGTATTGCTAGTCAGTCTAAGGCCACATTCTTCAGCATCAGTGCATCGTCGCTTACATCTAAATGGGTTGGTGAAGGTGAGAAGATGGTTCGTGCATTGTTTGCTGTTGCCAGGTGTCATCTTCCCGCTGTTATCTTCATTGATGAGATAGATTCTCTATTGTCTCAAAGAACAGATGGTGAGAACGATGCGTCAAGGAGAATAAAGACTGAATTTCTAGTGCAACTGGACGGTGCTACAACGAGTTCAGATGATAGACTTTTGGTTGTTGGCGCCACGAACAGGTTCGTCCGATTGTTTTCAATGACTTCGACGCTGCACTTCACCAAGTCCGCGCAAGCGTATCTGAGAAAGATCTTATTTTGTACACTGAGTGGAATAAACTTTATGGTAGTGGTTCAAAATGACCACCATACTGACCATGATGTGTTCGGTGATCTTATGATAACAATACTCAACTATTTAACACTTGTCCCGTGAAAAGAAAACAGTGCGTGTCGCAAGTTTATATTTGAAATAAACTTGTTTTCCCAGT

Protein

Uniprot

Uniprot term	Description
Q6PIW4	Fidgetin-like protein 1 OS=Homo sapiens OX=9606 GN=FIGNL1 PE=1 SV=2
Q6DDU8	Fidgetin-like protein 1 OS=Xenopus laevis OX=8355 GN=fignl1 PE=2 SV=1
A4IHT0	Fidgetin-like protein 1 OS=Xenopus tropicalis OX=8364 GN=fignl1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00004	AAA	ATPase family associated with various cellular activities (AAA)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR003959	Domain	ATPase, AAA-type, core	Interproscan
IPR050304	Family	Microtubule-severing AAA ATPase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23074	AAA DOMAIN-CONTAINING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0008568	Molecular Function	microtubule severing ATPase activity	Interproscan
GO:0140603	Molecular Function	obsolete ATP hydrolysis activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K22766	FIGNL1; fidgetin-like protein 1	EC:5.6.2.-	DNA repair and recombination proteins	ko03400	deepkoala