Detailed information of aint_s0305.g1.t1 in Acropora intermedia

Genomic Location: sc0000305_pilon:34797...41245
NR annotation: CAB3995464.1, Transposon Ty3-G Gag-Pol poly [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P04323Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
P10401Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
Q89703Putative enzymatic polyprotein OS=Cassava vein mosaic virus OX=38062 GN=ORF 3 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37984PROTEIN CBG26694Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan

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