Detailed information of aint_s0307.g10.t1 in Acropora intermedia

Genomic Location: sc0000307_pilon:71846...84460
NR annotation: XP_029207159.2, X-ray repair cross-complementing protein 5-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6DDS9X-ray repair cross-complementing protein 5 OS=Xenopus laevis OX=8355 GN=xrcc5.L PE=1 SV=1
P27641X-ray repair cross-complementing protein 5 OS=Mus musculus OX=10090 GN=Xrcc5 PE=1 SV=4
P13010X-ray repair cross-complementing protein 5 OS=Homo sapiens OX=9606 GN=XRCC5 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08785Ku_PK_bindKu C terminal domain likeDomainInterproscan
PF03731Ku_NKu70/Ku80 N-terminal alpha/beta domainDomainInterproscan
PF02735KuKu70/Ku80 beta-barrel domainDomainInterproscan
PF03730Ku_CKu70/Ku80 C-terminal armFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014893DomainKu, C-terminalInterproscan
IPR036494Homologous_superfamilyKu, C-terminal domain superfamilyInterproscan
IPR005161DomainKu70/Ku80, N-terminal alpha/betaInterproscan
IPR016194Homologous_superfamilySPOC-like, C-terminal domain superfamilyInterproscan
IPR024193FamilyKu80Interproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR006164DomainKu70/Ku80 beta-barrel domainInterproscan
IPR005160DomainKu70/Ku80 C-terminal armInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12604KU AUTOANTIGEN DNA HELICASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000723Biological Processtelomere maintenanceInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003684Molecular Functiondamaged DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006303Biological Processdouble-strand break repair via nonhomologous end joiningInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan
GO:0042162Molecular Functiontelomeric DNA bindingInterproscan
GO:0043564Cellular ComponentKu70:Ku80 complexInterproscan
GO:0003690Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0003678Molecular FunctionDNA helicase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10885XRCC5, KU80, G22P2; ATP-dependent DNA helicase 2 subunit 2-DNA repair and recombination proteinsko03400deepkoala

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