Detailed information of aint_s0321.g14.t2 in Acropora intermedia

Genomic Location: sc0000321_pilon:289746...331998
NR annotation: XP_015757883.1, PREDICTED: DNA repair protein RAD50-like isoform X1 [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A0A1L8GXM0DNA repair protein RAD50.L OS=Xenopus laevis OX=8355 GN=rad50.L PE=1 SV=1
Q92878DNA repair protein RAD50 OS=Homo sapiens OX=9606 GN=RAD50 PE=1 SV=1
Q9JIL8DNA repair protein RAD50 OS=Rattus norvegicus OX=10116 GN=Rad50 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13476AAA_23AAA domainDomainInterproscan
PF04423Rad50_zn_hookRad50 zinc hook motifMotifInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR038729DomainRad50/SbcC-type AAA domainInterproscan
IPR013134DomainRAD50, zinc hookInterproscan
IPR004584FamilyDNA repair protein Rad50, eukaryotesInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18867RAD50Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000722Biological Processtelomere maintenance via recombinationInterproscan
GO:0000794Cellular Componentcondensed nuclear chromosomeInterproscan
GO:0003691Molecular Functiondouble-stranded telomeric DNA bindingInterproscan
GO:0006302Biological Processdouble-strand break repairInterproscan
GO:0007004Biological Processtelomere maintenance via telomeraseInterproscan
GO:0030870Cellular ComponentMre11 complexInterproscan
GO:0032508Biological ProcessDNA duplex unwindingInterproscan
GO:0043047Molecular Functionsingle-stranded telomeric DNA bindingInterproscan
GO:0051880Molecular FunctionG-quadruplex DNA bindingInterproscan
GO:0070192Biological Processchromosome organization involved in meiotic cell cycleInterproscan
GO:0090305Biological Processobsolete nucleic acid phosphodiester bond hydrolysisInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0000723Biological Processtelomere maintenanceInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006281Biological ProcessDNA repairInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24220MYH1s; myosin heavy chain 1/2/3/4/8/13/7B/15-Cytoskeleton proteinsko04812deepkoala

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