Detailed information of aint_s0338.g27.t1 in Acropora intermedia

Genomic Location: sc0000338_pilon:313056...362441
NR annotation: XP_029203867.2, fibrocystin-L-like isoform X1 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q86WI1Fibrocystin-L OS=Homo sapiens OX=9606 GN=PKHD1L1 PE=1 SV=2
Q80ZA4Fibrocystin-L OS=Mus musculus OX=10090 GN=Pkhd1l1 PE=1 SV=1
E2RK30Fibrocystin OS=Canis lupus familiaris OX=9615 GN=PKHD1 PE=3 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07691PA14PA14 domainDomainInterproscan
PF10162G8G8 domainDomainInterproscan
PF01833TIGIPT/TIG domainDomainInterproscan
PF00028CadherinCadherin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019316DomainG8 domainInterproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR037524DomainPA14/GLEYA domainInterproscan
IPR002909DomainIPT domainInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR036439Homologous_superfamilyDockerin domain superfamilyInterproscan
IPR011658DomainPA14 domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR052387FamilyFibrocystin-related proteinInterproscan
IPR011050Homologous_superfamilyPectin lyase fold/virulence factorInterproscan
IPR008972Homologous_superfamilyCupredoxinInterproscan
IPR012334Homologous_superfamilyPectin lyase foldInterproscan
IPR006626RepeatParallel beta-helix repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46769POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0000272Biological Processpolysaccharide catabolic processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K27624PKHD1L1; fibrocystin-L-Cilium and associated proteinsko03037deepkoala

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