Gene detail

Detailed information of aint_s0454.g12.t1 in Acropora intermedia

Genomic Location: sc0000454_pilon:205106...223644
NR annotation: XP_015765126.1, PREDICTED: 26S protease regulatory subunit 7 isoform X1 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q5E9F9	26S proteasome regulatory subunit 7 OS=Bos taurus OX=9913 GN=PSMC2 PE=2 SV=3
P35998	26S proteasome regulatory subunit 7 OS=Homo sapiens OX=9606 GN=PSMC2 PE=1 SV=3
Q4R4R0	26S proteasome regulatory subunit 7 OS=Macaca fascicularis OX=9541 GN=PSMC2 PE=2 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17862	AAA_lid_3	AAA+ lid domain	Domain	Interproscan
PF00004	AAA	ATPase family associated with various cellular activities (AAA)	Domain	Interproscan
PF21236	PRS7_OB	26S proteasome regulatory subunit 7, OB domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR050221	Family	26S Proteasome Regulatory ATPase	Interproscan
IPR041569	Domain	AAA ATPase, AAA+ lid domain	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR003959	Domain	ATPase, AAA-type, core	Interproscan
IPR003960	Conserved_site	ATPase, AAA-type, conserved site	Interproscan
IPR048723	Domain	26S proteasome regulatory subunit 7-like, OB domain	Interproscan
IPR012340	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23073	26S PROTEASOME REGULATORY SUBUNIT	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008540	Cellular Component	proteasome regulatory particle, base subcomplex	Interproscan
GO:0036402	Molecular Function	proteasome-activating activity	Interproscan
GO:0043161	Biological Process	proteasome-mediated ubiquitin-dependent protein catabolic process	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03061	PSMC2, RPT1; 26S proteasome regulatory subunit T1	-	Proteasome	ko03051	deepkoala