Detailed information of aint_s0475.g14.t1 in Acropora intermedia

Genomic Location: sc0000475_pilon:174236...184043
NR annotation: XP_029194389.2, synaptonemal complex protein 1-like isoform X1 [Acropora millepora]
Species abbreviation AINTE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005881 (this species only)

 Pfam domain
No Pfam domain signature was detected for aint_s0475.g14.t1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR008827
all species →		FamilySynaptonemal complex protein 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46918
all species →		SYNAPTONEMAL COMPLEX PROTEIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000711
all species →		Biological Processmeiotic DNA repair synthesisInterproscan
GO:0000795
all species →		Cellular Componentsynaptonemal complexInterproscan
GO:0000801
all species →		Cellular Componentcentral elementInterproscan
GO:0000802
all species →		Cellular Componenttransverse filamentInterproscan
GO:0001673
all species →		Cellular Componentmale germ cell nucleusInterproscan
GO:0003690
all species →		Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0007130
all species →		Biological Processsynaptonemal complex assemblyInterproscan
GO:0051026
all species →		Biological Processchiasma assemblyInterproscan
GO:0051878
all species →		Biological Processlateral element assemblyInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for aint_s0475.g14.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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