Detailed information of aint_s0505.g2.t1 in Acropora intermedia

Genomic Location: sc0000505_pilon:18306...43710
NR annotation: XP_029209968.1, transitional endoplasmic reticulum ATPase [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6GL04Transitional endoplasmic reticulum ATPase OS=Xenopus tropicalis OX=8364 GN=vcp PE=2 SV=1
P46462Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3
Q3ZBT1Transitional endoplasmic reticulum ATPase OS=Bos taurus OX=9913 GN=VCP PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09336Vps4_CVps4 C terminal oligomerisation domainDomainInterproscan
PF02359CDC48_NCell division protein 48 (CDC48), N-terminal domainDomainInterproscan
PF02933CDC48_2Cell division protein 48 (CDC48), domain 2DomainInterproscan
PF17862AAA_lid_3AAA+ lid domainDomainInterproscan
PF00004AAAATPase family associated with various cellular activities (AAA)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR003960Conserved_siteATPase, AAA-type, conserved siteInterproscan
IPR005938FamilyAAA ATPase, CDC48 familyInterproscan
IPR009010Homologous_superfamilyAspartate decarboxylase-like domain superfamilyInterproscan
IPR015415DomainSpastin/Vps4, C-terminalInterproscan
IPR003338DomainCDC48, N-terminal subdomainInterproscan
IPR004201DomainCDC48, domain 2Interproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR050168FamilyAAA ATPase domain-containing proteinInterproscan
IPR029067Homologous_superfamilyCDC48 domain 2-like superfamilyInterproscan
IPR041569DomainAAA ATPase, AAA+ lid domainInterproscan
IPR003959DomainATPase, AAA-type, coreInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23077AAA-FAMILY ATPASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0016787Molecular Functionhydrolase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0030433Biological Processobsolete ubiquitin-dependent ERAD pathwayInterproscan
GO:0030970Biological Processretrograde protein transport, ER to cytosolInterproscan
GO:0031593Molecular Functionpolyubiquitin modification-dependent protein bindingInterproscan
GO:0034098Cellular ComponentVCP-NPL4-UFD1 AAA ATPase complexInterproscan
GO:0051228Biological Processmitotic spindle disassemblyInterproscan
GO:0071712Biological Processobsolete ER-associated misfolded protein catabolic processInterproscan
GO:0097352Biological Processautophagosome maturationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13525VCP, CDC48; transitional endoplasmic reticulum ATPase-Exosomeko04147deepkoala

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