Gene detail

Detailed information of aint_s0523.g16.t1 in Acropora intermedia

Genomic Location: sc0000523_pilon:177586...186318
NR annotation: XP_029203708.1, electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aint_s0523.g16.t1

AGACACAGAAGCACAGTGTTGTTGATGATTTCAAAGAACTTTTAGATTTATTTTCTGCCTACTTATGTGGAATTATCGAATCCGCAGTATCACTAGAGGTGCAAAAAGAGCGTTGCCGCTCTTACAAAGTCGCTCGTCTAGTGAATCAGTTCCGAAAATTACAACTCATTATACCATTGTACCACGAGAATCTGACGCAAGATGGAAAGATGTCGACATGGAAAGATTTTCGGACGAAGCGGATGTTGTTATTGTTGGAGGAGGACCGGCTGGCTTATCGGCAGCGATCAGGCTTAAACAACTAGCTGAAGAAAAGGGAACTGAGATTCGAGTCTGTCTCGTAGAGAAAGCTTCTGAAATTGGTGGACATACTTTATCTGGAGCTTGCCTAGAGCCAAGAGCTCTAAATGAGCTGATGCCTGACTGGGAAGACAAAGGGTCTCCCCTCAATACACCCGTGAAGGAGGACAAATTTGCAATACTAACAGAGAAACACAGTCTTCCTGTTCCAATATTACCAGGGTTACCTATGCATAATCATGGCAACTACATTGTGAGGCTTGGAAACTTTGTGCGGTGGCTCGGTGAACAGGCAGAAGCTTTAGGAGTAGAGATATACCCTGGATATGCTGCTAGTGAAGTTTTGTACCATGAGGATGGCAGTGTTAAAGGCATTGCAACAAATGATGTGGGAATTCATAAAGATGGGTCCCCTAAGCCCACCTTTGAGCGGGGCATGGAGCTTCATGCCAAGGTGACCATGTTTGGTGAAGGATGTCATGGCCATCTTGCAAAGAATTTATACAAGAAGTTTAATCTACGAGAAAACTGCGACCCTCAGACTTACGCCATTGGCCTCAAAGAGCTGTGGGAAATTGCTCCAGAGAAGCATCGGCCAGGACGTGTGGAACATACAGTTGGCTGGCCCCTGGACAAAGAAACGTATGGTGGTTCATTCTTGTATCACCTTCAGGAAGATTCACCACTAGTTGCTGTTGGTTTTGTGGTTGGTTTAGATTACACAAATCCTTATCTGTATCCATTCAAAGAATTTCAGCGCTTCAAACACCATCCTTCAGTCAAACCCACCTTTGAAGGTGGCAAGCGGATAGCTTATGGTGCCAGAGCCCTGAATGAGGGCGGTTTCCAGAGTATCCCGAAGCTGGCCTTCCCCGGTGGTCTCCTCATCGGCTGCAGTCCCGGCTTCATGAACGTACCTAAAATCAAAGGAACTCACACCGCCATGAAATCTGGGATGCTTGCGGCCGAGTGCGCGTTCGAGGCAATTGCAGATGAGAATTTCTCGTCACCAACTGCAGGTGGGTGCGGCAAATGTTCACTAAGGTTCAGAAATGTACCTCAAGAAGTTCTATTAAGAATGAGTAAGGGGGAAGGTCTCTTTCTCGAGTCTTACGAATCACGACTGAGAGATAGCTGGATCTGGAAGGAGCTTCAAAGTGTTCGTAATATAAGGCCCTCTTTCCACAGCCCGTTGGGTTTGTATGGCACCATGTTGTACACTGGAATTTTCTATTACATCTTCCGCGGCAAGGAACCTTGGACTCTGCGAAGCAGCAAACCCGATGCGGAACATTTAAAACCCTCCAAGGAATGCAAACCTATCGAGTATCCGAGACCCGATGGAGAAGTCAGTTTTGATTTACTGTCGTCTGTGGCCCTTAGCGGGACAAATCACGAGGGGGATCAGCCAGCTCATTTAACACTTCGGGATGACTCTGTTCCGGTCAATAGGAACTTGGCGATCTATGACGGCCCCGAGCAGAGGTTTTGCCCCGCTGGGGTGTACGAGTATGTTCCTAAGGAGGAGGGGGACGGGATGAGGTTACAGATAAACGCTCAGAACTGTGTACATTGTAAGACTTGCGACATCAAGGACCCGAGTCAGAATATCAACTGGGTTGTTCCTGAGGGGGGAGGGGGCCCGGCTTACAACGGGATGTGACGAACTGGATCAAGTTTCAAAATGTTTGAATTTTTTTTAAAATGAATTTCTTTCTCCACTTTTGCACCCGTGGAGGATTCTTTTTTCTCCGCGTTACATCGCTGGGAAATTAAGAATAATGATACATGGTTTTAAGAGAGACAAAGTAAAGTGTTTTGATTGGTCTTTCGAAAGCTTCGAAAAACATTTTCTTAAAACATAGCTTGAATTCAGGCGGAGATCCTTATATTTAATTTCGTAGATGTTTCTTTTGAATTCAAGAAGTAAAAAGCTTTGCGGAGTATTGTCTAAAAATAATTTAAAGTGCTGCTAAGAAATGTGTATATCTGGTTCCTGTGAGCCTTTTCAGTCCTTTGGAAACCGCATAAACAACAACAACAAACAACCAGGGTTGGTAAAAAGTAGGCCTTCATCGAAATCCGTGAGATTGTCGCATAAAAGTGTTTATCTGTGTTCGATATTCGCTGTCCTTTATTTCCACCTCCTGTACTGTCTTTAATGTTTTCAGGAAAAATGGAATAAATAACGAGAGAATTC

Protein

Uniprot

Uniprot term	Description
Q921G7	Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Mus musculus OX=10090 GN=Etfdh PE=1 SV=1
Q6UPE1	Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfdh PE=1 SV=1
P55931	Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Sus scrofa OX=9823 GN=ETFDH PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05187	ETF_QO	Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S	Family	Interproscan
PF07992	Pyr_redox_2	Pyridine nucleotide-disulphide oxidoreductase	Domain	Interproscan
PF21162	ETFQO_UQ-bd	ETF-QO, ubiquinone-binding	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036188	Homologous_superfamily	FAD/NAD(P)-binding domain superfamily	Interproscan
IPR007859	Domain	ETF-QO/FixX, C-terminal domain	Interproscan
IPR040156	Family	Electron transfer flavoprotein-ubiquinone oxidoreductase	Interproscan
IPR023753	Domain	FAD/NAD(P)-binding domain	Interproscan
IPR049398	Domain	ETF-QO/FixC, ubiquinone-binding	Interproscan
IPR017896	Domain	4Fe-4S ferredoxin-type, iron-sulphur binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10617	ELECTRON TRANSFER FLAVOPROTEIN-UBIQUINONE OXIDOREDUCTASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0051536	Molecular Function	iron-sulfur cluster binding	Interproscan
GO:0004174	Molecular Function	electron-transferring-flavoprotein dehydrogenase activity	Interproscan
GO:0022900	Biological Process	electron transport chain	Interproscan
GO:0031305	Cellular Component	obsolete integral component of mitochondrial inner membrane	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00311	ETFDH; electron-transferring-flavoprotein dehydrogenase	EC:1.5.5.1	Enzymes with EC numbers	-	deepkoala