Gene detail

Detailed information of aint_s0525.g4.t1 in Acropora intermedia

Genomic Location: sc0000525_pilon:145427...162595
NR annotation: XP_044167742.1, uncharacterized protein LOC114971228 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

aint_s0525.g4.t1

atggaagcatctgaaggccaacattccttgagtgagcatggctcagaagacaacaagccaccaaagctcagtttcaagctgaaaaagattggtgatgttgtaatttccagtgtaagatggagagatgtttatctaccagttgatattctactattgactgcggaaagctgtgatttcttgagctgtttctccttgctggaccaacctatcagaagttaccacaagaattttggctatgtctactttggatttgtgggagaggccagtgacagagcaaagctaagggttgcattgatgacttcttcaaaaggatctaccactcgagggggctctttaagagtgggtcggattgcaattagagttcttcggcctaaggctgtattttcagtggtaacttgcattagtttagactctgagaaggtcagaaggggagatgtagtgatatcttcgaagcttacaaatgcagagggattcaaatttcgcgtcagcccacttcttggtcatcttgttaaagatgcaccatatgggtgggttcctccgttgaaaaatcctggcaaatcagaagttaatatacatcccaatggtgatatcctgagcctgtcactgacattgaggcgccattatgatgatatttgtaaggaatatcctggggcagttgcaattgagacagaaggcaatgatgtttattatgctgcaccctatgatgcaagtattgaatgggtgatagtggcaggtgtggccagttattttcatcaaagccagtatgcaacttctgaatggatgtcctttgcaagcagcatggctgcctctgtggtggcaaagatgttaattcatccaacagttttccgcgaattgcggcactataaccaagacttcgatgaaagtgtattattcaagcctggaaccgtttcaatagatgatgttcctctcattgcgcatgagcttggtccttcatggaaaacggttggcacagtcctcaacttcccCgatgcatcctcatctgtaccagcggaaattaggggccggggccctgaggcagagcgtgcttttcaaaaggccatgaaaagtggcaaagtcaaagtctatcgcgggcgcatcatgctgcttggacaagaccgtgcaggaaaaacaagcctaaagaaatctcttctcggtttgccttttgacccggaggaagagagcactgttggagttgaagtggaccggtcgaaatgtgaactcgaggtggatgaagtccagaattggatgccgagtaaacgaaagaagcgtgacatgtctgagttcgaagaagaactcgcaaggctcattgtcatggatttgagagggaccaaagcaaatgacaacgattcaaccgcgactgatcgtaatgtggaggaagtgaagataactgatgaagtaccgttgaggtggttcaagtttgaaagagctgttgatgctcttgtggccaagcagatatacttcatggatctcgatcaatttctccctgttattcgacaattttgccaaatcgaagacgaggaagaagtgacagccatgctgaatttctatcatgatcttggcgtgattgtaaagcatggtcaaactgtagtgctggaggcccagtggctgatcgacctgttcaagcaacttataaccgtgcggccttttgacgaggctaatccttcgtacagggaacattggagagacctggaagtaaacggaattctgaggatagcactagtcgaccacgtattttccaagttcatggacaaaggcctttgcaaacaagatattctggatttgatggagcggcatgggctgattgccaaattttcgattgccactgacaaaaaccaagatgaacaaagatattttgttccgacgcagctaagatcatcgccatcagcactgtgtgagatcaagccgtctggatgtgatccgtgtccactagttcttcattttcttgatggttttgttccgcatgggctctttcctcagcttgtgtcgaagttcattcattggtgttcggaaaataggttaaaagaaactccacagcttttcaacaatggggccaggcttttcatcggaaaaccgatcacattttctcttatcctgatatgcagaaagagaggacgagttgtgatcaagacgattgcttgcaccttctgcgagttcgtcctggggaagaactga

Transcript

aint_s0525.g4.t1

caccttaaatgatcatggtctgaattcatttctttcacaaagatatcattctgtacaatctgagtggttggtgggatcattcccgcctctccgaacttaattattaaaggaagacaaggggtagattatggaagcatctgaaggccaacattccttgagtgagcatggctcagaagacaacaagccaccaaagctcagtttcaagctgaaaaagattggtgatgttgtaatttccagtgtaagatggagagatgtttatctaccagttgatattctactattgactgcggaaagctgtgatttcttgagctgtttctccttgctggaccaacctatcagaagttaccacaagaattttggctatgtctactttggatttgtgggagaggccagtgacagagcaaagctaagggttgcattgatgacttcttcaaaaggatctaccactcgagggggctctttaagagtgggtcggattgcaattagagttcttcggcctaaggctgtattttcagtggtaacttgcattagtttagactctgagaaggtcagaaggggagatgtagtgatatcttcgaagcttacaaatgcagagggattcaaatttcgcgtcagcccacttcttggtcatcttgttaaagatgcaccatatgggtgggttcctccgttgaaaaatcctggcaaatcagaagttaatatacatcccaatggtgatatcctgagcctgtcactgacattgaggcgccattatgatgatatttgtaaggaatatcctggggcagttgcaattgagacagaaggcaatgatgtttattatgctgcaccctatgatgcaagtattgaatgggtgatagtggcaggtgtggccagttattttcatcaaagccagtatgcaacttctgaatggatgtcctttgcaagcagcatggctgcctctgtggtggcaaagatgttaattcatccaacagttttccgcgaattgcggcactataaccaagacttcgatgaaagtgtattattcaagcctggaaccgtttcaatagatgatgttcctctcattgcgcatgagcttggtccttcatggaaaacggttggcacagtcctcaacttcccCgatgcatcctcatctgtaccagcggaaattaggggccggggccctgaggcagagcgtgcttttcaaaaggccatgaaaagtggcaaagtcaaagtctatcgcgggcgcatcatgctgcttggacaagaccgtgcaggaaaaacaagcctaaagaaatctcttctcggtttgccttttgacccggaggaagagagcactgttggagttgaagtggaccggtcgaaatgtgaactcgaggtggatgaagtccagaattggatgccgagtaaacgaaagaagcgtgacatgtctgagttcgaagaagaactcgcaaggctcattgtcatggatttgagagggaccaaagcaaatgacaacgattcaaccgcgactgatcgtaatgtggaggaagtgaagataactgatgaagtaccgttgaggtggttcaagtttgaaagagctgttgatgctcttgtggccaagcagatatacttcatggatctcgatcaatttctccctgttattcgacaattttgccaaatcgaagacgaggaagaagtgacagccatgctgaatttctatcatgatcttggcgtgattgtaaagcatggtcaaactgtagtgctggaggcccagtggctgatcgacctgttcaagcaacttataaccgtgcggccttttgacgaggctaatccttcgtacagggaacattggagagacctggaagtaaacggaattctgaggatagcactagtcgaccacgtattttccaagttcatggacaaaggcctttgcaaacaagatattctggatttgatggagcggcatgggctgattgccaaattttcgattgccactgacaaaaaccaagatgaacaaagatattttgttccgacgcagctaagatcatcgccatcagcactgtgtgagatcaagccgtctggatgtgatccgtgtccactagttcttcattttcttgatggttttgttccgcatgggctctttcctcagcttgtgtcgaagttcattcattggtgttcggaaaataggttaaaagaaactccacagcttttcaacaatggggccaggcttttcatcggaaaaccgatcacattttctcttatcctgatatgcagaaagagaggacgagttgtgatcaagacgattgcttgcaccttctgcgagttcgtcctggggaagaactgatttgcctgaagaatttctgcgatgaaacagtcagtcctggatgggagatgtggttcgaagtaccccatacccagaccatggaaccagaaggggacactcagatagcagacgcgaatcaagtttcgacaaaggagagaacaagaagacctggagggcagggaatggagactatagccttgaacatcgctgtcactgcattagccttgttcctcgccgttctttttgtaggtaCGTTTATAGATATACT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16095	COR	C-terminal of Roc, COR, domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR032171	Domain	C-terminal of Roc (COR) domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR035994	Homologous_superfamily	Nucleoside phosphorylase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0009116	Biological Process	nucleoside metabolic process	Interproscan