Gene detail

Detailed information of aint_s0530.g19.t1 in Acropora intermedia

Genomic Location: sc0000530_pilon:185216...194126
NR annotation: XP_029189759.2, RNA-binding protein 4B-like isoform X2 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aint_s0530.g19.t1

GGGTAGGCTTCTTCAGCGGCAGCCATCTTGTTTCCTTTCATTCGCTCTCGTCTCGTTGGTGCAGTTCAGCTGTTCAGTATGGCCAGCGAAGACGTTAGTCAAGACAATCTCGCAGAAGTAAAAAACCAGAACGAGGAAAACACTGAAACTGCCGACATTACGACGTCAGACGCCAATGGAGAAGGCACTGAGAGTAAGAGCAATCAACAAGATGAAGTCGAGAAAGAAGTGAAATTATATGTGGGAAATCTTCCCGACCAGTGTAGACGAGGGGCCTTGCAAGAGCTCTTCGAAAAATACGGCAAGGTTTCGCAGTGTGACATTGTTAAAAACTTTGCATTTGTGCACATGGTTGGAGAAAAGAATGCTAAAGATGCTCTTGAAAGTTTAGATGATTCCGAGTTTTGTGGAACTCACATCCAAGTGCAAtttGCCAAATCCAAAGGGAAGCCATCAGAGGATGAGTGCTTTTCATGTGGAAAACATGGCCACTGGGCAAAAGACTGTCCTAGGAGAAGAAGGTTCGATGATCGACGGGATTTTCGACGCAGTGACTATGGACCACCAAGAAGGAGCCCCTACGACCGACCACCACCCAGCTACTATGATCCATATATGGACCGACGTGGAGGTTACCCACCAAGCAGAGACTACTATGGCTACCAATACAGAAGTCGAAGCCCAGGAAGGTCTCCCCCAAGGTATACTGGCTTCTATGAAGGTTATCCGCGCCATGAGGGCTACGGCAGTCGCAGGTATTAAGCGCCTGGAATACCGAGCCCGAGCTGTCGAAGGACCGAAAAACTgtcgtgaatcgtcgtcgtggtagtcgtggtcgtgcggtcgggtgtggCCTGTTTAGCGTGCCGATGGATTTATGTTTATCCGCTCATTAGTTTTTATAGTTTACATTAAAGTAAACGATGAAGTTTTACGCTTTTCACGCTTGTGCCATTTTTAGTGACTTATGCAAAATAAAGCCGCGATGAAGGTCCTGAAGACGTAGAATATGAGCTTTCTGACATTGCTGGAGACTTTGTACTTTCCAATAAATGCGGATAGTTGAAACTGAAATTGCCAGCTTTTTACCCGATTCAATAACAGTGTAATAACAGTTTATTCAATGAGAAGGAGGTTTTCTCTTCAAAAAAAAAATACGGAATTGATACCATTGCCTTGGCATGAAGACAGGTTTTGAGAGATCGTTTTTACAAGAGAATCCAATTTCAAATAACTGCAACAAACCCCAGAAACGCTCTCGACTCTTCCGTAGGACGGTGTTAATTTTGGTCTGCGATTTTTCTCCTGGAACTGGTAAATTTTTATGATGCCCCAGTATATTTCCTATTTTCTCCAAACAAAAACTTAACATTCCTCTCCCTTTGGCCACCCGTAAGGATGGGAGCACCGTAGGTATACTGTGGGATGTTGAGAACCCTTACCCTAACAGTTGCGAAGCCCAAGGAATGAAATAAAATCAGTTCTTTTTTTCGTTTCATCCTTGCACGCGTTTGCGGATACTAATAAAGTGGTCATTCTAGTTAGACTTTTTTTGGTCGAGGAAACTTCCCTGTGAAATGTTTCCGCCACATTTCTCGAGTTTGCGGTGCATCGGTTCTCTGTGGACGGGGCGTTGGACCGTCGTTGGATCGCCGAGCTCGTCGTGCCAGAAATCGGAATTGATCGTCGCCGTCTTCGGGTTCGTCGTTGATCGCGTGAGTAGTCGTGTAACGACAGGAGTCTTTGTGTTCCTAGATCAGCGTTGTTCGTCTGCCGTTTCTTTCACGTCATTAAATTCAGACTTGAAGTGGTTTGTCAAGCAGCAGCACGCGTTTTTCATTTTGTTGAACAAAAGCTTGTTTGAATGCCACAGTGCTTCTAATCGTCTGTTCGTTGCAAACAGAACGAATTGGATTCCAATTGACGGTGATTTTGTTTGTTTTGATTGTGTAGGATGGTGAGCGCTTGTTAAGAACAAGTTTTGAAACGGCTCAAGTTCCTTTGCATGATAAGTCATCACGATTAGATCGCTTGACAAGTTGGGATCACGTGACAAGTTGTTTTGGTTGAGAACACGTGACCGGTTATCTGGATGAGGCGGTGTAACAAGTGGGTCCTTGCAAGGATTCGCAAGGCAGTCGCTCTCAACAAGGAAAATGCCTTTGGAGGTTCACGAGACCGCAGGGAAGGAGACCATGCTGCGAGGAGTGGGGTAGAGATCCTCCCCATTGAGGACCTATCCATGGGGAGGATATTCATTTCTGTttagttctaatttcataacagaaatttcgcacgtagcctctctttgaaagaaagactgaggggaactcggaaatggGTTTTTAATCTTGTCTCCCTCCAAAGCAATAGTATTTTTCCCTTATGGTATTCCCATCATCACTTCGTCTCTGAGAGCAATGTCTGGTTGGTATCAGTTCTTCCTGTGAAAGTTTTATTGATCTGCGATGCTGGGTTTGACATGGTGACGCGGCGGTCATATTTGTTCCCTTCAATATTGGAAGCGGTGGCAAAATTTTTTTTTCCTTAAAATTTTCCCCCGGGAATTGAGTCTGTCTTCGTTATGCAAAGCTGTTCTCTTTATTTTTATTAATTATTTTGTGTAAGAATCATGACCGATGAGCTTGTTGGTGAAAGCCAAGAATTGAGACATCATTCGCTATGGATGGTAGtcacgtgacgtcatcagcgccatgttggtgcacagaacaaaagtggaaaaagtct

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00098	zf-CCHC	Zinc knuckle	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan
IPR036875	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan