Gene detail

Detailed information of aint_s0546.g6.t2 in Acropora intermedia

Genomic Location: sc0000546_pilon:135988...153345
NR annotation: XP_015777903.1, PREDICTED: TNF receptor-associated factor 6-like isoform X6 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
Q28DL4	TNF receptor-associated factor 6 OS=Xenopus tropicalis OX=8364 GN=traf6 PE=2 SV=1
Q6DJN2	TNF receptor-associated factor 6-B OS=Xenopus laevis OX=8355 GN=traf6-b PE=2 SV=1
B6CJY4	TNF receptor-associated factor 6 OS=Cercocebus atys OX=9531 GN=TRAF6 PE=2 SV=1

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity RING\|RING
Ubiquitin Family	E3\|E3 activity RING\|U-box

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13923	zf-C3HC4_2	Zinc finger, C3HC4 type (RING finger)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR049627	Family	E3 ubiquitin-protein ligase complex SLX5-SLX8 subunit SLX8	Interproscan
IPR017907	Conserved_site	Zinc finger, RING-type, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47094	ELFLESS, ISOFORM B	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0140082	Molecular Function	SUMO-ubiquitin ligase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09160	K09160; uncharacterized protein	-	Function unknown	-	deepkoala