Detailed information of aint_s0775.g3.t1 in Acropora intermedia

Genomic Location: sc0000775_pilon:26426...51373
NR annotation: XP_044163420.1, LOW QUALITY PROTEIN: usherin-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O75445Usherin OS=Homo sapiens OX=9606 GN=USH2A PE=1 SV=3
Q2QI47Usherin OS=Mus musculus OX=10090 GN=Ush2A PE=1 SV=2
Q8K3K1Usherin OS=Rattus norvegicus OX=10116 GN=Ush2a PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00055Laminin_NLaminin N-terminal (Domain VI)DomainInterproscan
PF00053Laminin_EGFLaminin EGF domainDomainInterproscan
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF00041fn3Fibronectin type III domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002049DomainLaminin-type EGF domainInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR050440FamilyLaminin/Netrin Extracellular MatrixInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR008211DomainLaminin, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10574NETRIN/LAMININ-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005604Cellular Componentbasement membraneInterproscan
GO:0009887Biological Processanimal organ morphogenesisInterproscan
GO:0009888Biological Processtissue developmentInterproscan

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