Gene detail

Detailed information of aint_s2350.g1.t1 in Acropora intermedia

Genomic Location: sc0002350_pilon:1...7555
NR annotation: XP_029186305.2, threonine--tRNA ligase 1, cytoplasmic-like isoform X2 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q9D0R2	Threonine--tRNA ligase 1, cytoplasmic OS=Mus musculus OX=10090 GN=Tars1 PE=1 SV=2
Q3ZBV8	Threonine--tRNA ligase 1, cytoplasmic OS=Bos taurus OX=9913 GN=TARS1 PE=2 SV=1
Q5XHY5	Threonine--tRNA ligase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02824	TGS	TGS domain	Domain	Interproscan
PF07973	tRNA_SAD	Threonyl and Alanyl tRNA synthetase second additional domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012676	Homologous_superfamily	TGS-like	Interproscan
IPR012947	Domain	Threonyl/alanyl tRNA synthetase, SAD	Interproscan
IPR004095	Domain	TGS	Interproscan
IPR018163	Homologous_superfamily	Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily	Interproscan
IPR045864	Homologous_superfamily	Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)	Interproscan
IPR012675	Homologous_superfamily	Beta-grasp domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11451	THREONINE-TRNA LIGASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004812	Molecular Function	aminoacyl-tRNA ligase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0043039	Biological Process	tRNA aminoacylation	Interproscan
GO:0000166	Molecular Function	nucleotide binding	Interproscan
GO:0004829	Molecular Function	threonine-tRNA ligase activity	Interproscan
GO:0006435	Biological Process	threonyl-tRNA aminoacylation	Interproscan