Gene detail

Detailed information of aint_s4728.g1.t1 in Acropora intermedia

Genomic Location: sc0004728_pilon:1...2367
NR annotation: XP_015758708.1, PREDICTED: autophagy-related protein 16-1-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
Q09406	Autophagic-related protein 16.2 OS=Caenorhabditis elegans OX=6239 GN=atg-16.2 PE=1 SV=2
Q19124	Autophagic-related protein 16.1 OS=Caenorhabditis elegans OX=6239 GN=atg-16.1 PE=1 SV=2
Q2TBS9	WD40 repeat-containing protein SMU1 OS=Bos taurus OX=9913 GN=SMU1 PE=2 SV=1

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|Beta-prp
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|CDC20
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|DWD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR045160	Family	Autophagy-related protein 16	Interproscan
IPR001680	Repeat	WD40 repeat	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19878	AUTOPHAGY PROTEIN 16-LIKE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0000045	Biological Process	autophagosome assembly	Interproscan
GO:0000421	Cellular Component	autophagosome membrane	Interproscan