Detailed information of alor_g1052.t1 in Acropora loripes

Genomic Location: Acropora_loripes_98:389977...396921
NR annotation: XP_015771808.1, PREDICTED: uncharacterized protein LOC107350099 [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9I9D5Retinal homeobox protein Rx1 OS=Psalidodon fasciatus OX=223369 GN=rx1 PE=2 SV=1
O42357Retinal homeobox protein Rx2 OS=Danio rerio OX=7955 GN=rx2 PE=2 SV=1
O97039Retinal homeobox protein Rax (Fragment) OS=Dugesia japonica OX=6161 GN=RAX PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilyHomeobox

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00024PAN_1PAN domainDomainInterproscan
PF01410COLFIFibrillar collagen C-terminal domainFamilyInterproscan
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001356DomainHomeobox domainInterproscan
IPR003609DomainPAN/Apple domainInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR000885DomainFibrillar collagen, C-terminalInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16146INTELECTINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005201Molecular Functionextracellular matrix structural constituentInterproscan

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