Detailed information of alor_g11229.t1 in Acropora loripes

Genomic Location: Acropora_loripes_36:2526611...2530835
NR annotation: XP_015771454.1, PREDICTED: 72 kDa type IV collagenase-like isoform X1 [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P03957Stromelysin-1 OS=Rattus norvegicus OX=10116 GN=Mmp3 PE=1 SV=1
P09238Stromelysin-2 OS=Homo sapiens OX=9606 GN=MMP10 PE=1 SV=1
P45452Collagenase 3 OS=Homo sapiens OX=9606 GN=MMP13 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00413Peptidase_M10MatrixinDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR021190FamilyPeptidase M10AInterproscan
IPR036365Homologous_superfamilyPGBD-like superfamilyInterproscan
IPR036375Homologous_superfamilyHemopexin-like domain superfamilyInterproscan
IPR033739DomainPeptidase M10A, catalytic domainInterproscan
IPR006026DomainPeptidase, metallopeptidaseInterproscan
IPR001818DomainPeptidase M10, metallopeptidaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10201MATRIX METALLOPROTEINASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0030198Biological Processextracellular matrix organizationInterproscan
GO:0030574Biological Processcollagen catabolic processInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan

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