Gene detail

Detailed information of alor_g11292.t1 in Acropora loripes

Genomic Location: Acropora_loripes_32:335500...365246
NR annotation: XP_029205790.2, uncharacterized protein LOC114969618 [Acropora millepora]
Species Acropora loripes · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

alor_g11292.t1

ATGCGCACTCCCAGCATCGTTGGCCCAGTGTTGGCTCTGCTCCCTCTGTGTAATTCAGAAAATGCTGTTAGTCTGGCGTGCTTTTTCTTGTCGTATGCAGTAGATATAAAGACCAAAAAGAAACCAAAAAATGACTCTGGATGTGAGGAAACGACAGAGGTGTCCAAAGCACAAAGTACTAGCGCAATATCACTCCACAGTGAGTCTGCAGCCAGCGATGAGGATGATCCTACCTGTGACAACGAGGATGGCAATGGTTTTGATTTTCCTCTTCGAGGACGAAATCACAGTTCATTTACCAGTGAAGACAAAACTGCGAGCCTTGGATCACGTGCCGGAAGTGACGTGGAGATGTTAGCAGAATACCATGCCAACGAAGGACACAAAGAATCGAATGCCTCCTCTCCTACCTCCGACGATGCCACTGAATGTTTCGAGGAACAGAATCAGGCGCCAACCAAGAAGATTCTGAAGAAAGTGTCGGCGTATTTTAACACTGGAGAGCTCGTGGCTATAATGGGGCCTTCGGGTTGCGGAAAAACCACCCTGCTAGATTTGCTGACCGGAAGACGTCGGACTGGACACATAGAGGGCCAGGTTTATGTCAACGGGGTGGGCTTGGGGCAGGTCCAGGATTGGTACTCTCGTAAAATCGGCTACGTCTTACAACTTGCGGTGCCATACTATGAAGAACTTACTGTTCGACAGAATCTCTTTTTCGCTGCACACATGCGACTTCCCAGAGAAACCAGCGCCGCCGATAAATACGAGAGAGTGGAGCAAATAATAGCAGAGACTGGCTTGACGCAAATGGCCGACACGGTCATTGGTGGATCAGTAGGCCCCGGCCTGAGTGGAGGGCAAAAGCGTCGCCTCTGTGTCGCTCTTCAACTCATTAATATGCCTTCAGTGCTCTTTCTGGATGAACCAACTTCTGGCTTAGACGCGTCATCCTCTCTCGAGCTGCTGAACCATTTGAATCTCGTAGCAGAATCTGGCAGACTTGTTATTCTCACAATTCATCAGCCCAGACTGGAAATTTTTCATCTTTTTCACAAAATCCTTTTCTTGTGTGATGGACAGGTCGCGTATTACGGTGAGCCTGCAATGGCACCAGAGATATTCATTAAAGCGTATGCGCGCGCAACTACCGACGACTTCCGGCAGAGTGAGGAAGCTCCAAAAATCGACGCAAAAAATCCTGCTGACACCATCATGGATTTGTTGAACTGCCCTGAAGCTCGGCGTGCAATTCTGGATTATTACCAAACAAGCGGGGAACCACAGGCGGTCCAGGAAGCCATCAGGACGTCGCAGCAAAATGCTGGAAATACCATTTCCATGGGAACAATGGCAAAAAAAACTGAGGACGGAGCTGGTCGATTCAACAGAATTTTTGTGCTGGAAGGCAGAACCGCTGAGAAGCAAAGTCTTGGCCAACTCCTCTATTTCCCATTAATATTTTTCGCATTTGGAATAATAGTTGGGACTGTATATTTTGAAGCAGAGGAGAGAGACGGAATATTGCTGATGTCAGCTTATTGTGTTTATTGCTGCGCTAGCCCGCTTTTTCTTAGCTCCGTTTTAATGGCGCATCTCAATAAAGCCTTGAACATTTATCACCTTGAGCGAGCTGATGGATGTGGGAGATCGCTTGAGAATGTGGTACAGACTTTTGTGAGAACAACTGCATTGTATAATTTGCTATTCTACATCAACCCGCAGTTTTACGGTTATGCAGCTATCACAAAAGTTCTGTTGAAAGACGTGCGCCTAAAATGCCATTACGACTCTACACTGAGCTGTGTCAGTACTGATGGAAATGCTGTGTTGACAAGATTTGGCCTGGACACAGTTAATCCGTATGAACATCTCGCGATTATGTTGGGGATGACAGTTTTGTCTTTGCTCTTGTCTTGGCTGTTTTTAGAAGCAAAATACTGCACTCCACGCTGCTTTTCTAAAACACCGCCAGTATTCTCTGTTGATATACCACTGGAGAGCGTTGAAGTGCCTGTCAGCCCAATCGATGAAGCACCGACCAAAGAAGAAGAAGAAGAAAAAGAAGACGAAATAGAGATGCAAATCCCGCCTTCTCGCAATTCTCGCATTAACCGTTACAGTTCGAACCGTGTATCCGCTAAATCGAGGCTGGGGCTAATACGCGAGAACCACGGGTTTCATTCTGTGAAACTCCCTCGACCCGCTTCACAGCGGGCTCATTCGCCCGAAGTGACACTCCCTGATTTACAGTCCACCGACGGAGATCACGTACAGTTTCCTCGGAGGAGGAATAGGCTAGAGAGTGTGATGGAAGACGATCTTTGGAAACGCACGAGACAACAAATGCGTGAGAGAAAAACTAAATTGGAACATCGAATGTCTAGAGTGGAGAATATCGCTAGGCAGTTCTCCCTTAAGCCTGCGCAATCTCTACAATCGTTATCGATGCGGAAAAAAAGCAACAAGCATAAGACACCCCCTCGGAGAACTACCGTAGCGTCGTCGGCCTTCAGCGAAGAGAAACGAAAGGAGTTGTCGTTGAAGCGCGATGGAAAGCTTAAGGGAAGGAACAGTGATTCGGTCTTCAGGGAAGAGTTGGAAGATTCCGCAGCACCCCTTGTAATCCGCTCTCTGACACACCTTGGAGATTTCATTGACGGAGGAAGTACCACTGAGGTTTTCAAACGAAGCAGCGAGATGATAGAAGAGGAAAACGAAGAATTAGAGGAAGATGAAGCAGTTTTGGCGCCGGAGGAGGATGAAACTCATCAAGGAAGTCTAGGAGGAAAAGTTCACGGGAAAAATCCCTCGAATAGTTTTGAAGTTGAACCTGAAAGCTCACAGCATTCAAACAATACGGACGAAGGAAGAGCCGTAAAGAGAGTTTCAATGCATGGCTTTACCGAAAAATCTGAGAAGCATCTACAGCAGGCTTCAGATAACACATCCAAGCTAGAGACAGCACAAATGAAAATAGATTCTTTGCAGAGTCAACTGGAAAGATCTTTGCAGTCAACTGAACCACTAAGAAAAAATGCAGTTAGACTACACCGGGAAAAGTCGTTAGCTGATTCTGCCATCTTGGAATTGCAGGAGAAACTGCAGAAACTTGAGAAATTGAATTCAGAGCTGATGACTACAGTGAAATTAAAAGAGGAGCAGGAATGTGCTTGGCGACTGGAGAAACAAGTTCAGGCACAAGAGGTTCAAAAACAGAAGAAAAGCCTCGAGAAGAGCGAATCGACGATTTCAAAGTTGCAAGAGCAGCTGAAAAAAGAAAAAGAGCAATACAAAGAATTGAACAGATCTCTGACACAAGCCAACAAAAAGACTACAAAACTCGAAAAGCAACTTGAAGAGGCCAAGGATGGAATAGAAAGTATGAAGCTTGACGCAGAAATCGTACGAGGATATAATGGTGCTAAAGAAAGCTTCCGACCAAGAATGAAACGCAGAGGCCGCCAACCAGCCAAGCCACACAGGGAGACCAAACAAACCTCGCCTCCGGCCAGCTATTCAAAGCAACTCATAGCGCATATCATTCACGAGCTGAGCGAACTATCAGATATGGAAACTGCCCTCAGCCCGCTTCCTCCCAGTCCAGATAGACATTCCGTGGAAATGAGTAGTTCTTCGGAAGAGAGTGAAGACGAAACGAGAGCAGATGACAGTGATTCCAGTTTGGGTGATCTTGCAGAGATGATTATAGGAGATAAAACCGAACCGGGTGAATCCCCGACAAGTCCTTCAAATACTGTGATTGATACTTTGAACTGCAAGGAGGAAAATGATTTGCAAACCACAAAGAACGATTTGGCTTCTGAGGATGGAAAAAGGGAATTTGAACAAGTCGAATCGGAAGAGGCAACCAGAAGTGCAGTAGATGTTCCTGGTGATTATGGTGAATTTGAAAATCAAACTTCAAAAGGCCCGGGGAAGAAAAATGGAAACTCCGATTTAGGAGAAACGGATCTTAGACAGGCTCGAACTAACCTTAAAACGAAAGCTGAAGGCGGTGCTGCAGTCGATGATAAGGTAATTGAGAGTGAAAATCGCGTCTCGTTATCTGAGAAAAATATCAACACGTGTTTTGGAGAAATATCGGCAAATGGAGAAATGGGATCTTCTGTACCTTCATCTGAACAAAAAAGAACTGAAAATGGCACAGTTATCGATGGTATGGAAATTAATAGCAAGGATTCCAAATTATCGCGCGAAACGAAAGATGGTAACTCGGATTGCAAACGCGCCAAAGGTTTGAAATCTTTAACTAAAAGTTCCGAAGTGTCAGGAAGGGATGAAGACATCTCTGCTAATGGGGAAAACAAACAGGTAGAATTCACTCGTGAAACGAGAAAAAGATTAGTCGATCATACTGTAGTTGAAGACGCGAAAATTGAAAATACAAATTTCGAAGAATCAATGAAGAATGTTGCCACGTTGGTTAACGGAGAAATGGAACATTCACAGCCATTAACTCAGCTTGCAAAATTAACTCCTGTGAATGAGCACTTTGATCGTAAAAAGACTCAAAGTGAGAGTATCAAAGACTGTTTTCAAAATGGAAGGCTTGCGAATTGTGGAGAAATGGCATGTGAAGAACTTTTAGCTGAAAATGGTTCTTTGCCAAACTCGGCAAAGTCCAATACTGAGAGTGGAGTTACAGAACAAAACTTTGAGAGTAAACAAGATACTGTCGTTTCTGAGGTGGAAAAGCCACCCAGTGCTGGGAGAAAATCATCTCGGTTGACTAATGCAAACAAAAGAGATGAAGCTTCCGGAAGCGTAGAAACAACTTGCAAATTAAAAGTAACCGAGGTGGGTTCCAGCCCCAAACGTAACGAGAAACGCGTTGCGACGTCGCCGACGTCACGTGTCATGACTCGATCCAGGACTAAAGCGATGCGGCTCAGTGCCTCGTCTGGAGATGAAAGTGCGTCGGAAAACTGGACTGGGAATGATTCTAACTCGAGCCCAGAATGTATTTCAGACGGTTCACATCACGAGTTAGAGCGAAATGGTGTTGATAGAAACCCAAAGAATAGCAAAAGTGACGATAGATGCATAGATATACAAGTATCGGTCAAACGGCAGACACAGGGTTCTGACGCTGAGCTCTTTTGCCACGAGGTGTCGAACACTGGGTGTCCTGTGCAGACCGAAGAATCAATCCCAAGTTTCGTTGAAGACGTAAGTGAAAAAGATCTTACGGTTTCCTTCGCTAACGGTAACGAGAACCACAAACTTGTAAATGGAGATGAAGAACAGGAATCTGAAAATGAAAACGTGGTGTGCTCTGCGAAGCCAACGGAAAAAGCGAACAATTCTGTTGAACTGATGTCGCGTGATTCAGACGATTTTGAGGTGAAATCAGGGAACGACCTACAAAAGACAGCTAAAACAATGGACGAGCAAATTTCGTTGCAAGCGAAAGACTTTCCTGGTGTTAGAGAAACGTGGACACAAAGTAAAGAAGCTCTTATGGAAAAGAAGGAAAAATGTCTTGAACAGAACAGCAACGACGACAACAAATTCGTGGAAAGCTTTGAAGACGAGACAGATCATTTCAAACTTGATTTTGCCCCGAGTTTGCGCGCGACGCCATCTGTGCATGAAAGTTTAACACGAACTGTTTCGAATCCTGAGACAGAAAGAAGTTTCATTTTAGATAATTTAGTGAGTTATTGTGCCAACGATATTATTGAAGAACCAGCGCGAAATGTAGACGAAATTGAATTTGCGTCCATAGGCACCGGAGGTATGAAAGATGGAAAACTTGCTGCGAATACTCATAGTGATAAAGCGGATTTTAAATGCAGCTTAGTGGCAAAGACAACTTCTTCAGTTTGCTCAGAAATAAAAGAAGACAAAGCTAAGCTTTCGGTTGAAACGTTTTCACCAAATTTGTCGACATCAAACGGCGAGGAGTCAAATTCTAACGACCAAGATTTCAAATTGTATCAGGAAAATGAAATTCCTCAATTCAGTTTATCAACAGCAGATACGACCCCTTTATCAGAGACTGCCCCGCAGTCTGTAGCAGAGGAAAGGAAGCCTGGAAACTTAAATGATAGTGACCCAAAGAGGGTTATCAGTTCCAAGTTTGATGAGTCTGAGGGCGTTGTAAATTATGGCGCTTGTGAAATGTTTGATGACAGTCGTGTGGTTTTACCAACAGTATTATTGTCAATTCCAGAGTCGTTAGAGGAGTCGGATAGAAATAGAAACTCCACTGAAGACAGTAATTTCGCGTCACCACTAAAGAATGTGGACACCTTGGAAATTAACCCGGGAAATACTAATGACGGAGACAAAGCGGAGCTTTCGAAGTCCTTTAATGGAGTTCTTGATGCAATAACTGCTAGGTCAATTTCATTAGTAGACAAAGACAGAAATGAGTGCTGTGAAGACCGTAATTTTGCTTCAGCAGAAGATATTGAAAACGCCTCGGCGCTGAACCCAGACGACTTTATAAACAACGAAACTGCTGAGTGCTCTAATGAGACATCAGTGTTCCCCTTGGAGCATTCATCAAACCAAGAAGAAAAATCTATTACCACATGCAACGACGCTGAGGTTTCCTTCAGCTCTAGCGAAGTTTCAGAACACTTTTCTCCTAAATACATTCCTGTTTCTATTACGAATGCCGACGAACAAACCTCCGTATCATGCATTTTACAAGAGGAAAGAGTAGTTATAACGAACGAAGCTTCGAAATCGTGTGTCTCAGAGTCTTCGACTTTCAATGAAAGAAAAACGTGTTATCGTGTTGAAACTTGCGCCGAAATTGGAGAACTTGATTCCACATCTTCTTTGCGGGTAAATACAGAAAACACAGAAGGAGAAAATCATTGTCCTAGTGTTAATGTAAAAGACAACCTCGAGAACATGTCACTGAAAGGTAGTCTGCAAGACTCTCTAACAGCTCATGCTGCGATTCTGGAACTAGAAGAACGTATTGGTAATCATTTTTTAACACTTTCACCGTTACCTCCTTCTCCGAGTCCTTCTGACGAAGAATCGCCGGCTTTTGAAGACCTTAGTTTAGGTGATTTACCCCCTCTCTCACCACTTCCACCTTCGCCTCGTTCCTTGATCGACGAGATCTCTTTATTTTCTCCAGAACTCACAAGCACTGTTACCAATCAAACGCGAATCGATCGCCGTGAACTCCGCTCAGTTTCCAAAACTAGTTCACCCCCTCCGTCGGGGAACGTCTTTTTGGATGACACAAATATGCTACAAAAGAGTGTGAAACGGAAAGCTTCCACAGAAGACGTTTCGGTTGGTATTAAGAAAGCTGACAGTCGTGGAACTAAGAGTGCCTTTACTTGTAGTAGTAACATGGCGGCTTCAGGAAAAAAGAGTACCTTGAAGCGATCTTTACAAGAGACGTGTTCCCAATGTGCAAATGACTCTATTCATGCTTCTCAATGCAAGAAAATACGAACAAAACAAAATTCTAAGTTAAGTGAAGAAGGAACGTTGCCTCCAGACCTCCCCCCAGGCACGCAATCAAGGAATAATTCTAATTTTGATAGCTCGAGGTTGGACAGAAAGGCTTCCAACATTTGGACTAGTGATGCGCCAAAGACGGAAAAGGCTGCGAACTTTGGGAAAACTCTCAGACCAATGATGCCAAGACGATGTTCAAACGTTGCTTCCAAGACTGGCCTAACTACGGTTCGCCAGGGAACGAATACTGAGACCGACGGTGCGTCAGTGATGGTAGAACAATGTTCCAACATTTCCTCAAGCACTGGGCCAATGAAGGGCCAGCCTACCAAGGTCGCTCCAAAGACTGGCCCGACTTTGTTTCACCAGGCAACTGATATTGGGACAAATGGTAGGCCCATTATGGGACAACAATGTTCCAACATTGTCTCCGGCACTGGGCCAATGAAGGGCCAACCTGCCAAAACTGAGACGACCAGTTGCGAGCCGATGTTGGGAAAACAGAGTTCAAACATTTCTGCTAATACTGATTCGGTGATAGTAGGACAATCTGCGCAATTAAGTAATACACATTCCGAGCAAACGGACGTTGATAATCCAACTGAAGGCCAAGTCAGCAAGTATCGTCCTCTGCAAGTACGTTATAAAACCATGGCAGAAGTCAAGTACGCGCGTAAATGCTTAAATCGTCTCTACGAAGACTCAGTAGAAATAAAAGTCGTAGTAGAACGCCTGGGTGCTAAAAGGTGTATATCATCTTGCACACCTCTGTCGTCGGCAATCATTCATTTTCTGAAAACCCGGGAAGACGATCTGATGCCAGTAATTCAGGATAAACTGGACAAGAAGCAGGAGTTGCAGGAATGGAAACCCGTTCTAACCGGCTTTGAGGAACGCCTTTTGCAAGTGATAACTCAGCTAGCGGGAAGTTATCCGATGTTTGGGAACTTTGTGTCGCAGTTGGTAAACTTGTGCTGCCGTGGTTTAATGTCAGGGAACTACAACGCAAGTGGCGACAGCTTCAGAGGAGCTCTCTCGTTGTGGTAA

Transcript

alor_g11292.t1

Protein

alor_g11292.t1

MRTPSIVGPVLALLPLCNSENAVSLACFFLSYAVDIKTKKKPKNDSGCEETTEVSKAQSTSAISLHSESAASDEDDPTCDNEDGNGFDFPLRGRNHSSFTSEDKTASLGSRAGSDVEMLAEYHANEGHKESNASSPTSDDATECFEEQNQAPTKKILKKVSAYFNTGELVAIMGPSGCGKTTLLDLLTGRRRTGHIEGQVYVNGVGLGQVQDWYSRKIGYVLQLAVPYYEELTVRQNLFFAAHMRLPRETSAADKYERVEQIIAETGLTQMADTVIGGSVGPGLSGGQKRRLCVALQLINMPSVLFLDEPTSGLDASSSLELLNHLNLVAESGRLVILTIHQPRLEIFHLFHKILFLCDGQVAYYGEPAMAPEIFIKAYARATTDDFRQSEEAPKIDAKNPADTIMDLLNCPEARRAILDYYQTSGEPQAVQEAIRTSQQNAGNTISMGTMAKKTEDGAGRFNRIFVLEGRTAEKQSLGQLLYFPLIFFAFGIIVGTVYFEAEERDGILLMSAYCVYCCASPLFLSSVLMAHLNKALNIYHLERADGCGRSLENVVQTFVRTTALYNLLFYINPQFYGYAAITKVLLKDVRLKCHYDSTLSCVSTDGNAVLTRFGLDTVNPYEHLAIMLGMTVLSLLLSWLFLEAKYCTPRCFSKTPPVFSVDIPLESVEVPVSPIDEAPTKEEEEEKEDEIEMQIPPSRNSRINRYSSNRVSAKSRLGLIRENHGFHSVKLPRPASQRAHSPEVTLPDLQSTDGDHVQFPRRRNRLESVMEDDLWKRTRQQMRERKTKLEHRMSRVENIARQFSLKPAQSLQSLSMRKKSNKHKTPPRRTTVASSAFSEEKRKELSLKRDGKLKGRNSDSVFREELEDSAAPLVIRSLTHLGDFIDGGSTTEVFKRSSEMIEEENEELEEDEAVLAPEEDETHQGSLGGKVHGKNPSNSFEVEPESSQHSNNTDEGRAVKRVSMHGFTEKSEKHLQQASDNTSKLETAQMKIDSLQSQLERSLQSTEPLRKNAVRLHREKSLADSAILELQEKLQKLEKLNSELMTTVKLKEEQECAWRLEKQVQAQEVQKQKKSLEKSESTISKLQEQLKKEKEQYKELNRSLTQANKKTTKLEKQLEEAKDGIESMKLDAEIVRGYNGAKESFRPRMKRRGRQPAKPHRETKQTSPPASYSKQLIAHIIHELSELSDMETALSPLPPSPDRHSVEMSSSSEESEDETRADDSDSSLGDLAEMIIGDKTEPGESPTSPSNTVIDTLNCKEENDLQTTKNDLASEDGKREFEQVESEEATRSAVDVPGDYGEFENQTSKGPGKKNGNSDLGETDLRQARTNLKTKAEGGAAVDDKVIESENRVSLSEKNINTCFGEISANGEMGSSVPSSEQKRTENGTVIDGMEINSKDSKLSRETKDGNSDCKRAKGLKSLTKSSEVSGRDEDISANGENKQVEFTRETRKRLVDHTVVEDAKIENTNFEESMKNVATLVNGEMEHSQPLTQLAKLTPVNEHFDRKKTQSESIKDCFQNGRLANCGEMACEELLAENGSLPNSAKSNTESGVTEQNFESKQDTVVSEVEKPPSAGRKSSRLTNANKRDEASGSVETTCKLKVTEVGSSPKRNEKRVATSPTSRVMTRSRTKAMRLSASSGDESASENWTGNDSNSSPECISDGSHHELERNGVDRNPKNSKSDDRCIDIQVSVKRQTQGSDAELFCHEVSNTGCPVQTEESIPSFVEDVSEKDLTVSFANGNENHKLVNGDEEQESENENVVCSAKPTEKANNSVELMSRDSDDFEVKSGNDLQKTAKTMDEQISLQAKDFPGVRETWTQSKEALMEKKEKCLEQNSNDDNKFVESFEDETDHFKLDFAPSLRATPSVHESLTRTVSNPETERSFILDNLVSYCANDIIEEPARNVDEIEFASIGTGGMKDGKLAANTHSDKADFKCSLVAKTTSSVCSEIKEDKAKLSVETFSPNLSTSNGEESNSNDQDFKLYQENEIPQFSLSTADTTPLSETAPQSVAEERKPGNLNDSDPKRVISSKFDESEGVVNYGACEMFDDSRVVLPTVLLSIPESLEESDRNRNSTEDSNFASPLKNVDTLEINPGNTNDGDKAELSKSFNGVLDAITARSISLVDKDRNECCEDRNFASAEDIENASALNPDDFINNETAECSNETSVFPLEHSSNQEEKSITTCNDAEVSFSSSEVSEHFSPKYIPVSITNADEQTSVSCILQEERVVITNEASKSCVSESSTFNERKTCYRVETCAEIGELDSTSSLRVNTENTEGENHCPSVNVKDNLENMSLKGSLQDSLTAHAAILELEERIGNHFLTLSPLPPSPSPSDEESPAFEDLSLGDLPPLSPLPPSPRSLIDEISLFSPELTSTVTNQTRIDRRELRSVSKTSSPPPSGNVFLDDTNMLQKSVKRKASTEDVSVGIKKADSRGTKSAFTCSSNMAASGKKSTLKRSLQETCSQCANDSIHASQCKKIRTKQNSKLSEEGTLPPDLPPGTQSRNNSNFDSSRLDRKASNIWTSDAPKTEKAANFGKTLRPMMPRRCSNVASKTGLTTVRQGTNTETDGASVMVEQCSNISSSTGPMKGQPTKVAPKTGPTLFHQATDIGTNGRPIMGQQCSNIVSGTGPMKGQPAKTETTSCEPMLGKQSSNISANTDSVIVGQSAQLSNTHSEQTDVDNPTEGQVSKYRPLQVRYKTMAEVKYARKCLNRLYEDSVEIKVVVERLGAKRCISSCTPLSSAIIHFLKTREDDLMPVIQDKLDKKQELQEWKPVLTGFEERLLQVITQLAGSYPMFGNFVSQLVNLCCRGLMSGNYNASGDSFRGALSLW

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q55DW4	ABC transporter G family member 1 OS=Dictyostelium discoideum OX=44689 GN=abcG1 PE=3 SV=1
Q54T02	ABC transporter G family member 24 OS=Dictyostelium discoideum OX=44689 GN=abcG24 PE=3 SV=1
Q7XA72	ABC transporter G family member 21 OS=Arabidopsis thaliana OX=3702 GN=ABCG21 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001528 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00005 all species →	ABC_tran	ABC transporter	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR003439 all species →	Domain	ABC transporter-like, ATP-binding domain	Interproscan
IPR050352 all species →	Family	ATP-binding cassette subfamily G transporters	Interproscan
IPR017871 all species →	Conserved_site	ABC transporter-like, conserved site	Interproscan
IPR003593 all species →	Domain	AAA+ ATPase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48041 all species →	ABC TRANSPORTER G FAMILY MEMBER 28	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0042626 all species →	Molecular Function	ATPase-coupled transmembrane transporter activity	Interproscan
GO:0043190 all species →	Cellular Component	ATP-binding cassette (ABC) transporter complex	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for alor_g11292.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Co-expression network

Genes whose expression across the transcriptome samples of Acropora loripes tracks this one. Counts are over the whole network; the network view itself draws at most 100 partners per query gene (CNIDO_NET_TOP_K), so a hub gene can show fewer edges than the number below.

No co-expression network has been built for this species, so this gene has no partners to show. Networks are available for the species listed on the Network Analysis page.

Single-cell expression

Whether this gene can be visualised in the single-cell atlases of Acropora loripes, and in which cell types it is a marker. Expression is stored per cell, so the violin plot and the cell-type means are computed in the viewer — open a dataset to see them.

No single-cell dataset has been published for this species. The atlases that do exist are listed in the Cell Atlas.

Epigenetic marks

Chromatin and DNA-methylation data covering this gene. Peak calls are listed per sample with the genomic region the peak falls in; DNA methylation is listed as sample availability only, because those tables are queried by the DNA Methylation page itself.

No epigenomic data has been deposited for this species. The assays that exist across the site are described in the Epigenomic Data module.

What you can do with this gene

Every tool below opens with this gene already entered, so you land on the analysis rather than on an empty form. Links open in a new tab.

Analysis	What it does	Status
Primer design	Design PCR / qPCR primers on this gene’s sequence with the published primer3 settings. Opens with the primers already computed.	template found	open →
BLAST	Search this gene’s sequence against the CnidoSite BLAST databases. The query is filled in and the species’ database is preselected — press Run to start.	template found	open →
Expression heatmap	Draw this gene’s expression as a heatmap across all RNA-seq samples, and compare it with the genes you add next to it.	no expression matrix	–
Gene family / orthogroup	Look this gene up in the single-copy orthogroups built from the high-quality cnidarian genomes, and see which other species carry an orthologue.		open →
Gene set analysis	Start a gene-set enrichment analysis with this gene as the seed list. Add more genes on that page before running it.		open →