Detailed information of alor_g11388.t1 in Acropora loripes

Genomic Location: Acropora_loripes_32:1652603...1660041
NR annotation: XP_015768912.1, PREDICTED: SPARC-related modular calcium-binding protein 1-like isoform X1 [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q62288Testican-1 OS=Mus musculus OX=10090 GN=Spock1 PE=2 SV=2
Q08629Testican-1 OS=Homo sapiens OX=9606 GN=SPOCK1 PE=1 SV=1
P14543Nidogen-1 OS=Homo sapiens OX=9606 GN=NID1 PE=1 SV=3
Gene familySubfamily
Transcription Factors FamilyTF_bZIP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00086Thyroglobulin_1Thyroglobulin type-1 repeatDomainInterproscan
PF10591SPARC_Ca_bdgSecreted protein acidic and rich in cysteine Ca binding regionDomainInterproscan
PF07716bZIP_2Basic region leucine zipperCoiled-coilInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000716DomainThyroglobulin type-1Interproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR019577DomainSPARC/Testican, calcium-binding domainInterproscan
IPR036857Homologous_superfamilyThyroglobulin type-1 superfamilyInterproscan
IPR004827DomainBasic-leucine zipper domainInterproscan
IPR051950FamilyDevelopmental regulator and protease inhibitorInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR046347Homologous_superfamilyBasic-leucine zipper domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12352SECRETED MODULAR CALCIUM-BINDING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan

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