Detailed information of alor_g11517.t1 in Acropora loripes

Genomic Location: Acropora_loripes_32:3275790...3296254
NR annotation: CAH3159227.1, unnamed protein product, partial [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6PEH4U3 small nucleolar RNA-associated protein 25 homolog OS=Danio rerio OX=7955 GN=utp25 PE=1 SV=2
Q642T7U3 small nucleolar RNA-associated protein 25 homolog OS=Xenopus tropicalis OX=8364 GN=utp25 PE=2 SV=1
Q68CQ4U3 small nucleolar RNA-associated protein 25 homolog OS=Homo sapiens OX=9606 GN=UTP25 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06862UTP25Utp25, U3 small nucleolar RNA-associated SSU processome protein 25FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR010678FamilyU3 small nucleolar RNA-associated protein 25Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12933ORF PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0006364Biological ProcessrRNA processingInterproscan
GO:0034511Molecular FunctionU3 snoRNA bindingInterproscan
GO:0000462Biological Processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0019843Molecular FunctionrRNA bindingInterproscan
GO:0032040Cellular Componentsmall-subunit processomeInterproscan

TOP