Detailed information of alor_g12458.t1 in Acropora loripes

Genomic Location: Acropora_loripes_15:3070641...3072066
NR annotation: XP_015778168.1, PREDICTED: hemicentin-2-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7Z5N4Protein sidekick-1 OS=Homo sapiens OX=9606 GN=SDK1 PE=1 SV=3
Q3UH53Protein sidekick-1 OS=Mus musculus OX=10090 GN=Sdk1 PE=1 SV=1
Q8BQC3Immunoglobulin superfamily DCC subclass member 3 OS=Mus musculus OX=10090 GN=Igdcc3 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan
PF07679I-setImmunoglobulin I-set domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050958FamilyCell Adhesion and Cytoskeletal OrganizationInterproscan
IPR008160RepeatCollagen triple helix repeatInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR013098DomainImmunoglobulin I-setInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45080CONTACTIN 5Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0008046Molecular Functionaxon guidance receptor activityInterproscan
GO:0030424Cellular ComponentaxonInterproscan
GO:0043025Cellular Componentneuronal cell bodyInterproscan
GO:0050808Biological Processsynapse organizationInterproscan

TOP