Gene detail

Detailed information of alor_g14311.t1 in Acropora loripes

Genomic Location: Acropora_loripes_44:1989169...2003707
NR annotation: XP_015771121.1, PREDICTED: hemicentin-1-like isoform X20 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

alor_g14311.t1

ATGCGGGACATGGTTTCATCTAGGAAGGTTGGCAACCCCAAGCCATCTTACACATGGAAGAGAAATGGTGCAGTTATACAGCGAGGTCAAGAATCAAATTACACAATCACTTCAGCAAAGAAAGAGGATAAAGGGCAGTACACTTGTGAAGCTGTGGTTTCTATTCCAGAACTGAGCTACACTCGTTCTGCTAGCTACACTGTGGATGTTAAGGTTAAATTTTCTCCACATGTAAACAGTTTGTTAAGCAATCAAACTCTAGATGAAGGAAATGATGCCTCATTCACATGCAAGGCAGAAGCCTACCCTGCGTCAATCACTTTTAACTGGTTTAAGAATTTGACCAAGTTAAGTGTAAATGCAGAGTTTTCAATTGTCAGTTCTGGTTCAGAGAGCAGGCTGACTGTGAGGCAAATAAAAAGGGACAGTGCTGCTTGGTACAGCTGTTCGGGACAAAACACAGTGGGAACTGGAGAAAAGAAGTCTGTTTACCTGGAAGTGAATTATCCTCCAAAAACTGTCACAGTGACAACAAGCCCATCAAAGGTCAATGAAGGCCAAAGTATGACTTTAACTTGTCACTCAGATGGATTCCCTGATCCAGCGTTCTCCTGGAAGTTCAATAACAGGGTTCTCAATGGTGCCTTGAAAAGAGACTTTTTGTTAGCCAATACAGAGGTCAAAGATTCAGGAAATTACACTTGCGTAGTTACCAACAGTAAAGGGACAAATCATTTTACAAAGGTTGTCAGTGTACAATACAAACCAACTGTCACCCATTTTACAACAGGAAATGCTGAAAACAGTGCTGTGATAGGAAGGGATGTGACTCTTACATGCAGTGCAAATGGTTTTTCAATTCCACAGTACATCATTAAACGCAATAAAACTGAGGTGATAAGAAATGCCCCTGGCACATTTGTTGTCCGCAATGTACAGCTCAGTGCAGAGTCTGACACATATTCTTGCGAACCTTTTAATGATCAAGGCAGTGGGCCAATTAAAGAACTGAAGATCACTGTGTATGTTCCTTCCTATTTTCCTGCCATCTCTCTGAGTCATGCCAACAAAACTGAAAACGATACTCACACCTTCTCCTGTACAGCATTAGGCAAACCACAAGCACAAATTTTTTGGATGTTGAATGGAAAGAATCTCACTCATACACCACCGTACAATATTTCAGAGTCATTTTCCAAAGTCCAAGATTCTAAACTGTACAAAACTCTTGGGTACTTGACTATCACCAGTATAACATGGAAAGAAAAGGGTCTTTATTCTTGTGTTGCCTATAATCCAGCTGGTCAGGAGACACAAACTGCAGAGCTTAATGTGAAATTCTCGTTGTTAGATCGGCCAGTTGTTCAATTCCCAAAGGATTATCCAAAGAACCAGACTCTGGCTGAGGGTGAGAATGTGACTTTCTATTGCAAAATGATTGGCAATCCAGAGACTGTGCAACACAAGTGGCAGTTCAATGGTATCGATATTCCTGGTGCAAGCTGCGACAATGGTTGCCCTTTCTTACGTTACACAAAGCGCGGAGTTACCCAGCAGGATGCAGGACTGTATTCATGCATTGGTTGGAATGAACTGGGATATGGGTCCCCCGCAACTGCAGAACTCTTTGTTAGACAGGCTCCCACTGAACCAGCAGAAGACATCGACAAAGATGTAATATATGCAACAATCATTAGCGTCTTGGTGGTAATGATGGCTTCAGGTGTAGCTTACGTGATTATCAAGCGGAAGAGGCGGGCGAGGGAAGTTAAAATATATGTTCTTCTGTTGTTGGAAGTTTTAGACGCCAATATAGCGACTGATTGCACCCCTCTTCCTTTCAGACGATTAGACGTAAGAGAGACAGTCAAGGAATCTCATTTTAACGTAAACATAGAAGATGGAAGAGACGAAGGAGCAGACGGAATGAGTTACTTGTCCGCAAAGAAGATCATTCACCGAGACCTTGCTGCTCGTAATATTCTGGTTGGGGAAGGAGAAAAGTGTAAAATAACGGACTTTGGAATGGCTAGGAATGTTCAACTGGAAAGTGTTTATGAGAGGACAACAACGGGTCGAATTCCAGTGAAGTGGACAGCTTGCGAAGCTCTTCTGCAAGGTCGCTATACAACCAAGAGTGACGTGTGGAGCTTTGGAGTGGTGCTTTACGAGATATTCACCATTGGTGGACAACCCTATCCTGGGATGAGCACAGGGAAACTGAGGGAATTGCTGGCCTCCGGCTACAGGATGCCGAAACCGAACCATGTAGCTGAGACCCTGTATCTGATCATGCTAAACTGTTGGAAAGAAGATCCAGACGATCGGCCATCTTTTGAACAACTTCGACACGAGCTAAAACTCATGGAAAACCAACACAAGAGACTCATCAGCATGAAGGACTATGACACAAAGCTTTATGAGAACATGGAAGATTTGATGTCCTAG

Transcript

alor_g14311.t1

Protein

Uniprot

Uniprot term	Description
P42689	Tyrosine-protein kinase SRK3 (Fragment) OS=Spongilla lacustris OX=6055 GN=SRK3 PE=2 SV=1
Q86PM4	Fibroblast growth factor receptor OS=Hydra vulgaris OX=6087 GN=FGFR PE=2 SV=1
P42690	Tyrosine-protein kinase isoform SRK4 OS=Spongilla lacustris OX=6055 GN=SRK1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07714	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan
PF13927	Ig_3	Immunoglobulin domain	Domain	Interproscan
PF07679	I-set	Immunoglobulin I-set domain	Domain	Interproscan
PF13895	Ig_2	Immunoglobulin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001245	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR008266	Active_site	Tyrosine-protein kinase, active site	Interproscan
IPR051170	Family	Neural and epithelial cell adhesion domain-containing protein	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR020635	Domain	Tyrosine-protein kinase, catalytic domain	Interproscan
IPR013098	Domain	Immunoglobulin I-set	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12231	CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0004713	Molecular Function	protein tyrosine kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan