Gene detail

Detailed information of alor_g14949.t1 in Acropora loripes

Genomic Location: Acropora_loripes_57:1820379...1821425
NR annotation: XP_029189238.2, uncharacterized protein LOC114956332 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q9ZVA0	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 7 OS=Arabidopsis thaliana OX=3702 GN=LSH7 PE=1 SV=1
Q9FZ51	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 8 OS=Arabidopsis thaliana OX=3702 GN=LSH8 PE=1 SV=1
A2XED8	Protein G1-like7 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_10694 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04852	ALOG_dom	ALOG domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013762	Homologous_superfamily	Integrase-like, catalytic domain superfamily	Interproscan
IPR006936	Domain	ALOG domain	Interproscan
IPR011010	Homologous_superfamily	DNA breaking-rejoining enzyme, catalytic core	Interproscan
IPR002104	Domain	Integrase, catalytic domain	Interproscan
IPR040222	Family	ALOG family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31165	PROTEIN G1-LIKE2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0006310	Biological Process	DNA recombination	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0009299	Biological Process	mRNA transcription	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K07484	K07484; transposase	-	Replication and repair	-	deepkoala