Gene detail

Detailed information of alor_g15685.t1 in Acropora loripes

Genomic Location: Acropora_loripes_3:5566659...5568573
NR annotation: XP_044170091.1, paired box protein Pax-6-like isoform X1 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
P53544	Homeobox protein goosecoid OS=Danio rerio OX=7955 GN=gsc PE=2 SV=1
P53545	Homeobox protein goosecoid OS=Gallus gallus OX=9031 GN=GSC PE=2 SV=1
Q02591	Homeobox protein goosecoid OS=Mus musculus OX=10090 GN=Gsc PE=1 SV=1

Gene family	Subfamily
Transcription Factors Family	Homeobox

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00046	Homeodomain	Homeodomain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001356	Domain	Homeobox domain	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR050649	Family	Paired Homeobox Transcription Factors	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24329	HOMEOBOX PROTEIN ARISTALESS	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0000977	Molecular Function	RNA polymerase II transcription regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan