Gene detail

Detailed information of alor_g15713.t1 in Acropora loripes

Genomic Location: Acropora_loripes_3:5930177...5936397
NR annotation: XP_029202040.2, LOW QUALITY PROTEIN: cysteine proteinase 2-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q3T178	Vacuolar protein sorting-associated protein 28 homolog OS=Bos taurus OX=9913 GN=VPS28 PE=2 SV=1
Q9UK41	Vacuolar protein sorting-associated protein 28 homolog OS=Homo sapiens OX=9606 GN=VPS28 PE=1 SV=1
Q9D1C8	Vacuolar protein sorting-associated protein 28 homolog OS=Mus musculus OX=10090 GN=Vps28 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08246	Inhibitor_I29	Cathepsin propeptide inhibitor domain (I29)	Domain	Interproscan
PF00112	Peptidase_C1	Papain family cysteine protease	Domain	Interproscan
PF03997	VPS28	VPS28 protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013201	Domain	Cathepsin propeptide inhibitor domain (I29)	Interproscan
IPR038765	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan
IPR007143	Family	Vacuolar protein sorting-associated Vps28	Interproscan
IPR000169	Active_site	Cysteine peptidase, cysteine active site	Interproscan
IPR000668	Domain	Peptidase C1A, papain C-terminal	Interproscan
IPR037206	Homologous_superfamily	VPS28, C-terminal domain superfamily	Interproscan
IPR017899	Domain	Vacuolar protein sorting-associated, VPS28, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12937	VACUOLAR PROTEIN SORTING 28, ISOFORM 2 VPS28	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000813	Cellular Component	ESCRT I complex	Interproscan
GO:0032509	Biological Process	endosome transport via multivesicular body sorting pathway	Interproscan
GO:0043328	Biological Process	protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway	Interproscan
GO:0044877	Molecular Function	protein-containing complex binding	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0008234	Molecular Function	cysteine-type peptidase activity	Interproscan