Gene detail

Detailed information of alor_g16049.t1 in Acropora loripes

Genomic Location: Acropora_loripes_60:454581...467173
NR annotation: XP_044177870.1, LIM/homeobox protein Lhx9-like isoform X2 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q90881	LIM/homeobox protein Lhx9 OS=Gallus gallus OX=9031 GN=LHX9 PE=2 SV=2
Q80W90	LIM/homeobox protein Lhx9 OS=Rattus norvegicus OX=10116 GN=Lhx9 PE=2 SV=1
A0JNI8	LIM/homeobox protein Lhx9 OS=Bos taurus OX=9913 GN=LHX9 PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00412	LIM	LIM domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050453	Family	LIM/homeobox transcription factors	Interproscan
IPR001781	Domain	Zinc finger, LIM-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24208	LIM/HOMEOBOX PROTEIN LHX	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000977	Molecular Function	RNA polymerase II transcription regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0030182	Biological Process	neuron differentiation	Interproscan